RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SS18Q15532 418 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 RNASE13Q5GAN3 156 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 TEX261Q6UWH6 196 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 MRAP2Q96G30 205 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
CTDNEP1-203ENST00000570385 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 A8MWL6 223 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 SMKR1H3BMG3 65 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 TAGLN2P37802 199 aaKnown RBP5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 SPINK6Q6UWN8 80 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 AMN1Q8IY45 258 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 CDC42SE2Q9NRR3 84 aa5.34□□□□□ -1.55
CTDNEP1-203ENST00000570385 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 HIGD1CA8MV81 97 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 MALP21145 153 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 CAMPP49913 170 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 POLR2KP53803 58 aaKnown RBP5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 CD164L2Q6UWJ8 174 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 ALKAL2Q6UX46 152 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 TCTE3Q8IZS6 198 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 ZNF664Q8N3J9 261 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 BORCS7Q96B45 105 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
CTDNEP1-203ENST00000570385 TRAV13-1A0A0B4J241 112 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 C7orf77A4D0Y5 90 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 TMEM250H0YL14 139 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 RAB4AP20338 218 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 FCER1GP30273 86 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 PTTG1IPP53801 180 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 SRSF9Q13242 221 aaKnown RBP eCLIP5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 Q6ZRP5 223 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 FAM231DQ6ZW35 169 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 C5orf38Q86SI9 138 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 TMEM191AQ9H0A3 160 aa5.32□□□□□ -1.56
CTDNEP1-203ENST00000570385 TRBV27A0A0K0K1C4 114 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 COX7A2LO14548 114 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 MRPL52Q86TS9 123 aaKnown RBP5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 TSKUQ8WUA8 353 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 CAMK2N2Q96S95 79 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 SMIM7Q9BQ49 75 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
CTDNEP1-203ENST00000570385 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 VCYO14598 125 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 LCE2BO14633 110 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 BLOC1S1P78537 153 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 C9orf116Q5BN46 136 aaPredicted RBP5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 CT83Q5H943 113 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 Q6ZUT4 128 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 LINC01551Q86U37 167 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 EIF5A2Q9GZV4 153 aaKnown RBP5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 PKIGQ9Y2B9 76 aa5.3□□□□□ -1.56
CTDNEP1-203ENST00000570385 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 C1orf196B1AJZ1 125 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 APOMO95445 188 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 MT-ND6P03923 174 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 SUMO2P61956 95 aaKnown RBP5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 PHF5AQ7RTV0 110 aaKnown RBP5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 NRACQ8N912 160 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 NUP35Q8NFH5 326 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 ISOC2Q96AB3 205 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 PSORS1C2Q9UIG4 136 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
CTDNEP1-203ENST00000570385 hCG_2014768A0A024R1R8 64 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 SPAG11BQ08648 103 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 RIGQ13278 110 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 C1orf137Q5JT78 98 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 OSTCQ9NRP0 149 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 V9GYV3 84 aa5.28□□□□□ -1.56
CTDNEP1-203ENST00000570385 SRP19P09132 144 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-203ENST00000570385 RPL39P62891 51 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-203ENST00000570385 MRPL51Q4U2R6 128 aaKnown RBP5.27□□□□□ -1.57
CTDNEP1-203ENST00000570385 KIR2DL4Q99706 377 aa5.27□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM168BA1KXE4 195 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 AKAP14Q86UN6 197 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 KRTAP11-1Q8IUC1 163 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 ORAOV1Q8WV07 137 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM210AQ96ND0 272 aa5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 CSDC2Q9Y534 153 aaKnown RBP5.26□□□□□ -1.57
CTDNEP1-203ENST00000570385 A0A087WZ39 114 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 PPP1R17O96001 155 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 CKS2P33552 79 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 SMAGPQ0VAQ4 97 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 ADIRFQ15847 76 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 TMEM241Q24JQ0 296 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 C10orf25Q5T742 122 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM104BQ5XKR9 115 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 FAM104AQ969W3 186 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 NAT8BQ9UHF3 227 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 LPAP08519 4548 aa5.25□□□□□ -1.57
CTDNEP1-203ENST00000570385 PPP1R2P9O14990 202 aa5.24□□□□□ -1.57
CTDNEP1-203ENST00000570385 TCAPO15273 167 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms