RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
USB1-214ENST00000568848 RPL23P62829 140 aaKnown RBP9.14□□□□□ -0.95
USB1-214ENST00000568848 FOXI1Q12951 378 aa9.14□□□□□ -0.95
USB1-214ENST00000568848 V9GYV3 84 aa9.14□□□□□ -0.95
USB1-214ENST00000568848 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
USB1-214ENST00000568848 XCL1P47992 114 aa9.13□□□□□ -0.95
USB1-214ENST00000568848 RNASEKQ6P5S7 137 aaKnown RBP9.13□□□□□ -0.95
USB1-214ENST00000568848 ISOC2Q96AB3 205 aa9.13□□□□□ -0.95
USB1-214ENST00000568848 BORCS7Q96B45 105 aa9.13□□□□□ -0.95
USB1-214ENST00000568848 SDHAF1A6NFY7 115 aa9.12□□□□□ -0.95
USB1-214ENST00000568848 ADIRFQ15847 76 aa9.12□□□□□ -0.95
USB1-214ENST00000568848 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
USB1-214ENST00000568848 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
USB1-214ENST00000568848 PEA15Q15121 130 aa9.11□□□□□ -0.95
USB1-214ENST00000568848 FAM74A3Q4VXF1 159 aa9.11□□□□□ -0.95
USB1-214ENST00000568848 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
USB1-214ENST00000568848 TMEM191AQ9H0A3 160 aa9.11□□□□□ -0.95
USB1-214ENST00000568848 FAM231BA6NCW3 169 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 RAB4AP20338 218 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 AMMECR1LQ6DCA0 310 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 Q6ZRP5 223 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 AMN1Q8IY45 258 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 CARD19Q96LW7 228 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 NAT8Q9UHE5 227 aa9.1□□□□□ -0.95
USB1-214ENST00000568848 SMKR1H3BMG3 65 aa9.09□□□□□ -0.95
USB1-214ENST00000568848 CCL25O15444 150 aa9.09□□□□□ -0.95
USB1-214ENST00000568848 PMCHP20382 165 aa9.09□□□□□ -0.95
USB1-214ENST00000568848 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
USB1-214ENST00000568848 KRTAP9-2Q9BYQ4 174 aa9.09□□□□□ -0.95
USB1-214ENST00000568848 TRBV6-5A0A0K0K1A5 114 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 NCR2O95944 276 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 APCSP02743 223 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 FGF6P10767 208 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 RIGQ13278 110 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 ST20Q9HBF5 79 aa9.08□□□□□ -0.96
USB1-214ENST00000568848 I3L3M4 83 aa9.07□□□□□ -0.96
USB1-214ENST00000568848 PHF5AQ7RTV0 110 aaKnown RBP9.07□□□□□ -0.96
USB1-214ENST00000568848 TMEM242Q9NWH2 141 aa9.07□□□□□ -0.96
USB1-214ENST00000568848 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
USB1-214ENST00000568848 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
USB1-214ENST00000568848 SMIM27A0A1W2PRY6 76 aa9.06□□□□□ -0.96
USB1-214ENST00000568848 TSHBP01222 138 aa9.06□□□□□ -0.96
USB1-214ENST00000568848 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
USB1-214ENST00000568848 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
USB1-214ENST00000568848 SMDT1Q9H4I9 107 aa9.06□□□□□ -0.96
USB1-214ENST00000568848 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
USB1-214ENST00000568848 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
USB1-214ENST00000568848 MRAP2Q96G30 205 aa9.05□□□□□ -0.96
USB1-214ENST00000568848 H7C423 109 aa9.04□□□□□ -0.96
USB1-214ENST00000568848 ESDP10768 282 aa9.04□□□□□ -0.96
USB1-214ENST00000568848 CAMPP49913 170 aa9.04□□□□□ -0.96
USB1-214ENST00000568848 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
USB1-214ENST00000568848 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
USB1-214ENST00000568848 IGLV4-69A0A075B6H9 119 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 C1orf137Q5JT78 98 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 FAM104BQ5XKR9 115 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 NRACQ8N912 160 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 OR5A1Q8NGJ0 315 aa9.03□□□□□ -0.96
USB1-214ENST00000568848 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.97
USB1-214ENST00000568848 TRBV27A0A0K0K1C4 114 aa9.02□□□□□ -0.97
USB1-214ENST00000568848 MT-ND6P03923 174 aa9.02□□□□□ -0.97
USB1-214ENST00000568848 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
USB1-214ENST00000568848 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
USB1-214ENST00000568848 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
USB1-214ENST00000568848 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
USB1-214ENST00000568848 VCYO14598 125 aa9.01□□□□□ -0.97
USB1-214ENST00000568848 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
USB1-214ENST00000568848 ZNF25P17030 456 aaPredicted RBP9□□□□□ -0.97
USB1-214ENST00000568848 SUMO2P61956 95 aaKnown RBP9□□□□□ -0.97
USB1-214ENST00000568848 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
USB1-214ENST00000568848 TMEM101Q96IK0 257 aa9□□□□□ -0.97
USB1-214ENST00000568848 BTF3L4Q96K17 158 aa9□□□□□ -0.97
USB1-214ENST00000568848 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
USB1-214ENST00000568848 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
USB1-214ENST00000568848 C7orf77A4D0Y5 90 aa8.99□□□□□ -0.97
USB1-214ENST00000568848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
USB1-214ENST00000568848 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
USB1-214ENST00000568848 FCER1GP30273 86 aa8.99□□□□□ -0.97
USB1-214ENST00000568848 A0A1B0GW15 77 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 PPP1R17O96001 155 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 CKS2P33552 79 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 PRR4Q16378 134 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 CDC42SE2Q9NRR3 84 aa8.98□□□□□ -0.97
USB1-214ENST00000568848 LINC00862A6NCI5 91 aa8.97□□□□□ -0.97
USB1-214ENST00000568848 RAB14P61106 215 aa8.97□□□□□ -0.97
USB1-214ENST00000568848 HBBP68871 147 aa8.97□□□□□ -0.97
USB1-214ENST00000568848 MRPL52Q86TS9 123 aaKnown RBP8.97□□□□□ -0.97
USB1-214ENST00000568848 ZNF664Q8N3J9 261 aa8.97□□□□□ -0.97
USB1-214ENST00000568848 D6R8Y8 96 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 PPP1R2P9O14990 202 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 SS18Q15532 418 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 CD164L2Q6UWJ8 174 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 C5orf38Q86SI9 138 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 KIR2DL4Q99706 377 aa8.96□□□□□ -0.98
USB1-214ENST00000568848 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms