RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 ZNF727A8MUV8 499 aa9.6□□□□□ -0.87
SMPD3-208ENST00000566723 C7orf33Q8WU49 177 aa9.6□□□□□ -0.87
SMPD3-208ENST00000566723 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
SMPD3-208ENST00000566723 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 TRBV27A0A0K0K1C4 114 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 LINC00959A0A1B0GUT2 108 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 PHOX2AO14813 284 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 CCL25O15444 150 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 RAB4AP20338 218 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
SMPD3-208ENST00000566723 MAJINQ3KP22 176 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 MRPL52Q86TS9 123 aaKnown RBP9.59□□□□□ -0.87
SMPD3-208ENST00000566723 AMN1Q8IY45 258 aa9.59□□□□□ -0.87
SMPD3-208ENST00000566723 IGHV1-58A0A0C4DH39 117 aa9.58□□□□□ -0.88
SMPD3-208ENST00000566723 C7orf77A4D0Y5 90 aa9.58□□□□□ -0.88
SMPD3-208ENST00000566723 SRP19P09132 144 aaKnown RBP9.58□□□□□ -0.88
SMPD3-208ENST00000566723 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
SMPD3-208ENST00000566723 V9GYV3 84 aa9.58□□□□□ -0.88
SMPD3-208ENST00000566723 SS18Q15532 418 aa9.57□□□□□ -0.88
SMPD3-208ENST00000566723 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
SMPD3-208ENST00000566723 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
SMPD3-208ENST00000566723 A0A096LNI7 61 aa9.56□□□□□ -0.88
SMPD3-208ENST00000566723 RIGQ13278 110 aa9.56□□□□□ -0.88
SMPD3-208ENST00000566723 STPG4Q8N801 248 aa9.56□□□□□ -0.88
SMPD3-208ENST00000566723 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
SMPD3-208ENST00000566723 CARD19Q96LW7 228 aa9.56□□□□□ -0.88
SMPD3-208ENST00000566723 SMKR1H3BMG3 65 aa9.55□□□□□ -0.88
SMPD3-208ENST00000566723 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
SMPD3-208ENST00000566723 ZNF664Q8N3J9 261 aa9.55□□□□□ -0.88
SMPD3-208ENST00000566723 ISOC2Q96AB3 205 aa9.55□□□□□ -0.88
SMPD3-208ENST00000566723 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
SMPD3-208ENST00000566723 VCYO14598 125 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 PPP1R17O96001 155 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 FCER1GP30273 86 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 PRR3P79522 188 aaKnown RBP9.54□□□□□ -0.88
SMPD3-208ENST00000566723 FAM74A3Q4VXF1 159 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 NRACQ8N912 160 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 LINC00526Q96FQ7 95 aa9.54□□□□□ -0.88
SMPD3-208ENST00000566723 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
SMPD3-208ENST00000566723 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
SMPD3-208ENST00000566723 TMEM241Q24JQ0 296 aa9.53□□□□□ -0.88
SMPD3-208ENST00000566723 NAT8BQ9UHF3 227 aa9.53□□□□□ -0.88
SMPD3-208ENST00000566723 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
SMPD3-208ENST00000566723 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
SMPD3-208ENST00000566723 KIR2DL4Q99706 377 aa9.52□□□□□ -0.89
SMPD3-208ENST00000566723 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
SMPD3-208ENST00000566723 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
SMPD3-208ENST00000566723 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
SMPD3-208ENST00000566723 PPP1R2P9O14990 202 aa9.51□□□□□ -0.89
SMPD3-208ENST00000566723 CAMPP49913 170 aa9.51□□□□□ -0.89
SMPD3-208ENST00000566723 SYCNQ0VAF6 134 aa9.51□□□□□ -0.89
SMPD3-208ENST00000566723 ADIRFQ15847 76 aa9.51□□□□□ -0.89
SMPD3-208ENST00000566723 COX7A2LO14548 114 aa9.5□□□□□ -0.89
SMPD3-208ENST00000566723 MALP21145 153 aa9.5□□□□□ -0.89
SMPD3-208ENST00000566723 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
SMPD3-208ENST00000566723 FAM104BQ5XKR9 115 aa9.5□□□□□ -0.89
SMPD3-208ENST00000566723 NAT8Q9UHE5 227 aa9.5□□□□□ -0.89
SMPD3-208ENST00000566723 SMIM27A0A1W2PRY6 76 aa9.49□□□□□ -0.89
SMPD3-208ENST00000566723 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
SMPD3-208ENST00000566723 Q6ZUT4 128 aa9.49□□□□□ -0.89
SMPD3-208ENST00000566723 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 TRAV13-1A0A0B4J241 112 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 LINC00862A6NCI5 91 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 C9JQL5 133 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 PTTG1IPP53801 180 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 TMEM18Q96B42 140 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 C20orf78Q9BR46 151 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
SMPD3-208ENST00000566723 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
SMPD3-208ENST00000566723 A0A1B0GW15 77 aa9.47□□□□□ -0.89
SMPD3-208ENST00000566723 RPL32P62910 135 aaKnown RBP9.47□□□□□ -0.89
SMPD3-208ENST00000566723 TRBV24-1A0A075B6N3 115 aa9.46□□□□□ -0.9
SMPD3-208ENST00000566723 TCAPO15273 167 aa9.46□□□□□ -0.9
SMPD3-208ENST00000566723 CKS2P33552 79 aa9.46□□□□□ -0.9
SMPD3-208ENST00000566723 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
SMPD3-208ENST00000566723 A0A1B0GVG6 124 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 SRSF3P84103 164 aaKnown RBP9.45□□□□□ -0.9
SMPD3-208ENST00000566723 GAGE2BQ13066 116 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 PEA15Q15121 130 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 SMIM2Q9BVW6 85 aa9.45□□□□□ -0.9
SMPD3-208ENST00000566723 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 APOMO95445 188 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
SMPD3-208ENST00000566723 HBBP68871 147 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 Q6ZRP5 223 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
SMPD3-208ENST00000566723 LRP2P98164 4655 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 D6R8Y8 96 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 F8W036 122 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 S100A8P05109 93 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 SPAG11BQ08648 103 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
SMPD3-208ENST00000566723 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
SMPD3-208ENST00000566723 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
SMPD3-208ENST00000566723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
SMPD3-208ENST00000566723 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
SMPD3-208ENST00000566723 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms