RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 ST20Q9HBF5 79 aa10.39□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CT83Q5H943 113 aa10.38□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 MRPL52Q86TS9 123 aaKnown RBP10.38□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CDC42SE2Q9NRR3 84 aa10.38□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 A0A0J9YXV3 536 aa10.37□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 TRBV27A0A0K0K1C4 114 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 SS18Q15532 418 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 FAM210AQ96ND0 272 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 TMEM191AQ9H0A3 160 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 RAB4AP20338 218 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CEBPGP53567 150 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 KRTAP10-8P60410 259 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 ALKAL2Q6UX46 152 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 BORCS7Q96B45 105 aa10.35□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 A0A1B0GUT8 65 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 C7orf77A4D0Y5 90 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 PTTG1IPP53801 180 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 AMN1Q8IY45 258 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
VPS9D1-AS1-201ENST00000562298 CAMPP49913 170 aa10.33□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 BLOC1S1P78537 153 aa10.33□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 REG3GQ6UW15 175 aa10.33□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 Q6ZRP5 223 aa10.33□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 IGLV4-69A0A075B6H9 119 aa10.32□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 SMKR1H3BMG3 65 aa10.32□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 SMIM7Q9BQ49 75 aa10.32□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 RNASE13Q5GAN3 156 aaKnown RBP10.31□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 UBE2D4Q9Y2X8 147 aa10.31□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 C1orf196B1AJZ1 125 aa10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 NRACQ8N912 160 aa10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 NUP35Q8NFH5 326 aa10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 OSTCQ9NRP0 149 aa10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 COX7A2LO14548 114 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 VCYO14598 125 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 MALP21145 153 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 FCER1GP30273 86 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 ISOC2Q96AB3 205 aa10.29□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 ZNF727A8MUV8 499 aa10.28□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 SUMO2P61956 95 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 EIF5A2Q9GZV4 153 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 V9GYV3 84 aa10.28□□□□□ -0.76
VPS9D1-AS1-201ENST00000562298 TRAV13-1A0A0B4J241 112 aa10.27□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 APOMO95445 188 aa10.27□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 Q6ZUT4 128 aa10.27□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.26□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 SRP19P09132 144 aaKnown RBP10.26□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 RIGQ13278 110 aa10.26□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 C5orf38Q86SI9 138 aa10.26□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 AKAP14Q86UN6 197 aa10.26□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 PPP1R17O96001 155 aa10.25□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 C9orf116Q5BN46 136 aaPredicted RBP10.25□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 C2orf48Q96LS8 159 aa10.25□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 MRPL51Q4U2R6 128 aaKnown RBP10.24□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 OPRPNQ99935 248 aaPredicted RBP10.24□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 LPAP08519 4548 aa10.24□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 NAT8BQ9UHF3 227 aa10.23□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 PPP1R2P9O14990 202 aa10.22□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 SPAG11BQ08648 103 aa10.22□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 FAM104BQ5XKR9 115 aa10.22□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 PHF5AQ7RTV0 110 aaKnown RBP10.22□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 MT-ND6P03923 174 aa10.21□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.77
VPS9D1-AS1-201ENST00000562298 hCG_2014768A0A024R1R8 64 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 TRBV24-1A0A075B6N3 115 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 TMEM18Q96B42 140 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 C20orf78Q9BR46 151 aa10.2□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 SMIM27A0A1W2PRY6 76 aa10.19□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 LINC00862A6NCI5 91 aa10.19□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 TMEM241Q24JQ0 296 aa10.19□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 FAM74A3Q4VXF1 159 aa10.19□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 IGHV3OR16-9A0A0B4J2B5 98 aa10.18□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 RPL32P62910 135 aaKnown RBP10.18□□□□□ -0.78
VPS9D1-AS1-201ENST00000562298 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms