RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 FAM74A3Q4VXF1 159 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 SPACA4Q8TDM5 124 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 NAT8BQ9UHF3 227 aa8.59□□□□□ -1.03
USB1-205ENST00000561743 A0A087WYN8 130 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 OXTP01178 125 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 XCL1P47992 114 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
USB1-205ENST00000561743 ADIRFQ15847 76 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 MRPL52Q86TS9 123 aaKnown RBP8.58□□□□□ -1.04
USB1-205ENST00000561743 NRACQ8N912 160 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 NAT8Q9UHE5 227 aa8.58□□□□□ -1.04
USB1-205ENST00000561743 C7orf77A4D0Y5 90 aa8.57□□□□□ -1.04
USB1-205ENST00000561743 CCL25O15444 150 aa8.57□□□□□ -1.04
USB1-205ENST00000561743 COX6A2Q02221 97 aa8.57□□□□□ -1.04
USB1-205ENST00000561743 CDC42SE2Q9NRR3 84 aa8.57□□□□□ -1.04
USB1-205ENST00000561743 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
USB1-205ENST00000561743 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
USB1-205ENST00000561743 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
USB1-205ENST00000561743 VCYO14598 125 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 PPP1R17O96001 155 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 PEA15Q15121 130 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
USB1-205ENST00000561743 ZNF664Q8N3J9 261 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
USB1-205ENST00000561743 FCER1GP30273 86 aa8.54□□□□□ -1.04
USB1-205ENST00000561743 SS18Q15532 418 aa8.54□□□□□ -1.04
USB1-205ENST00000561743 FAM104BQ5XKR9 115 aa8.54□□□□□ -1.04
USB1-205ENST00000561743 SMDT1Q9H4I9 107 aa8.54□□□□□ -1.04
USB1-205ENST00000561743 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 PPP1R2P9O14990 202 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 CAMPP49913 170 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 CD164L2Q6UWJ8 174 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
USB1-205ENST00000561743 CSDC2Q9Y534 153 aaKnown RBP8.53□□□□□ -1.04
USB1-205ENST00000561743 A0A096LNI7 61 aa8.52□□□□□ -1.05
USB1-205ENST00000561743 A0A1B0GW15 77 aa8.52□□□□□ -1.05
USB1-205ENST00000561743 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
USB1-205ENST00000561743 TRBV24-1A0A075B6N3 115 aa8.51□□□□□ -1.05
USB1-205ENST00000561743 LINC00862A6NCI5 91 aa8.51□□□□□ -1.05
USB1-205ENST00000561743 PHOX2AO14813 284 aa8.51□□□□□ -1.05
USB1-205ENST00000561743 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
USB1-205ENST00000561743 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 A0A1B0GXF2 115 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 C1orf196B1AJZ1 125 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 RPL32P62910 135 aaKnown RBP8.5□□□□□ -1.05
USB1-205ENST00000561743 SMAGPQ0VAQ4 97 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 MRPL54Q6P161 138 aaKnown RBP8.5□□□□□ -1.05
USB1-205ENST00000561743 Q6ZUT4 128 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 CARD19Q96LW7 228 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 C20orf78Q9BR46 151 aa8.5□□□□□ -1.05
USB1-205ENST00000561743 TNFRSF6BO95407 300 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 CKS2P33552 79 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 HBBP68871 147 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 Q6ZRU5 148 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 STPG4Q8N801 248 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 C7orf33Q8WU49 177 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
USB1-205ENST00000561743 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 D6R8Y8 96 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 TMEM18Q96B42 140 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
USB1-205ENST00000561743 F8W036 122 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 COX7A2LO14548 114 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 NPYP01303 97 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 S100A8P05109 93 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 RPL39P62891 51 aaKnown RBP8.47□□□□□ -1.05
USB1-205ENST00000561743 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 PKIGQ9Y2B9 76 aa8.47□□□□□ -1.05
USB1-205ENST00000561743 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
USB1-205ENST00000561743 TCAPO15273 167 aa8.46□□□□□ -1.06
USB1-205ENST00000561743 MALP21145 153 aa8.46□□□□□ -1.06
USB1-205ENST00000561743 PRR3P79522 188 aaKnown RBP8.46□□□□□ -1.06
USB1-205ENST00000561743 PPBPP02775 128 aa8.45□□□□□ -1.06
USB1-205ENST00000561743 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
USB1-205ENST00000561743 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
USB1-205ENST00000561743 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
USB1-205ENST00000561743 ORMDL3Q8N138 153 aa8.43□□□□□ -1.06
USB1-205ENST00000561743 CAMK2N2Q96S95 79 aa8.43□□□□□ -1.06
USB1-205ENST00000561743 OPRPNQ99935 248 aaPredicted RBP8.43□□□□□ -1.06
USB1-205ENST00000561743 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
USB1-205ENST00000561743 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
USB1-205ENST00000561743 APOMO95445 188 aa8.42□□□□□ -1.06
USB1-205ENST00000561743 MRPS36P82909 103 aaKnown RBP8.42□□□□□ -1.06
USB1-205ENST00000561743 C2orf48Q96LS8 159 aa8.42□□□□□ -1.06
USB1-205ENST00000561743 IGHV3OR16-9A0A0B4J2B5 98 aa8.41□□□□□ -1.06
USB1-205ENST00000561743 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
USB1-205ENST00000561743 PNRC1Q12796 327 aaPredicted RBP8.41□□□□□ -1.06
USB1-205ENST00000561743 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
USB1-205ENST00000561743 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms