RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 NCR2O95944 276 aa7.31□□□□□ -1.24
USP3-220ENST00000561381 APCSP02743 223 aa7.31□□□□□ -1.24
USP3-220ENST00000561381 TAGLN2P37802 199 aaKnown RBP7.31□□□□□ -1.24
USP3-220ENST00000561381 LCE5AQ5TCM9 118 aa7.31□□□□□ -1.24
USP3-220ENST00000561381 A0A096LNI7 61 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 H7C423 109 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 GATCO43716 136 aaKnown RBP7.3□□□□□ -1.24
USP3-220ENST00000561381 XCL1P47992 114 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 SMIM15Q7Z3B0 74 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 STPG4Q8N801 248 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 LYPD6BQ8NI32 183 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 C7orf33Q8WU49 177 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 LINC00526Q96FQ7 95 aa7.3□□□□□ -1.24
USP3-220ENST00000561381 TSHBP01222 138 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 PMCHP20382 165 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
USP3-220ENST00000561381 ODF1Q14990 250 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 TMEM242Q9NWH2 141 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 TNXBP22105 4242 aa7.29□□□□□ -1.24
USP3-220ENST00000561381 TRBV6-5A0A0K0K1A5 114 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 A8MWL6 223 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 I3L3M4 83 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 CCL25O15444 150 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 ESDP10768 282 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 CEBPGP53567 150 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 TEX261Q6UWH6 196 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 ALKAL2Q6UX46 152 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 FAM231DQ6ZW35 169 aa7.28□□□□□ -1.24
USP3-220ENST00000561381 TMEM250H0YL14 139 aa7.27□□□□□ -1.25
USP3-220ENST00000561381 ZNF25P17030 456 aaPredicted RBP7.27□□□□□ -1.25
USP3-220ENST00000561381 BTF3L4Q96K17 158 aa7.27□□□□□ -1.25
USP3-220ENST00000561381 IGHV1-58A0A0C4DH39 117 aa7.26□□□□□ -1.25
USP3-220ENST00000561381 LINC00310P59036 64 aa7.26□□□□□ -1.25
USP3-220ENST00000561381 TMEM101Q96IK0 257 aa7.26□□□□□ -1.25
USP3-220ENST00000561381 ST20Q9HBF5 79 aa7.26□□□□□ -1.25
USP3-220ENST00000561381 HIGD1CA8MV81 97 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 RAB4AP20338 218 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 POLR2KP53803 58 aaKnown RBP7.25□□□□□ -1.25
USP3-220ENST00000561381 BLOC1S1P78537 153 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 CT83Q5H943 113 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 AMN1Q8IY45 258 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 MRAP2Q96G30 205 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 CARD19Q96LW7 228 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 LINC01600Q96MT4 127 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 CDC42SE2Q9NRR3 84 aa7.25□□□□□ -1.25
USP3-220ENST00000561381 LRP2P98164 4655 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 SMKR1H3BMG3 65 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 SS18Q15532 418 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
USP3-220ENST00000561381 LINC01551Q86U37 167 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 TSKUQ8WUA8 353 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 BORCS7Q96B45 105 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 TMEM191AQ9H0A3 160 aa7.24□□□□□ -1.25
USP3-220ENST00000561381 TRBV27A0A0K0K1C4 114 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 C7orf77A4D0Y5 90 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 SYCNQ0VAF6 134 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
USP3-220ENST00000561381 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 ZNF664Q8N3J9 261 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 SMIM7Q9BQ49 75 aa7.23□□□□□ -1.25
USP3-220ENST00000561381 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
USP3-220ENST00000561381 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
USP3-220ENST00000561381 LINC00474Q9P2X8 69 aa7.22□□□□□ -1.25
USP3-220ENST00000561381 hCG_2014768A0A024R1R8 64 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 IGLV4-69A0A075B6H9 119 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 ZNF727A8MUV8 499 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 CAMPP49913 170 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 PTTG1IPP53801 180 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 GAGE2BQ13066 116 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 AKAP14Q86UN6 197 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 NRACQ8N912 160 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 OSTCQ9NRP0 149 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 V9GYV3 84 aa7.21□□□□□ -1.26
USP3-220ENST00000561381 VCYO14598 125 aa7.2□□□□□ -1.26
USP3-220ENST00000561381 SRP19P09132 144 aaKnown RBP7.2□□□□□ -1.26
USP3-220ENST00000561381 FCER1GP30273 86 aa7.2□□□□□ -1.26
USP3-220ENST00000561381 SRSF9Q13242 221 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP3-220ENST00000561381 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
USP3-220ENST00000561381 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
USP3-220ENST00000561381 UBE2D4Q9Y2X8 147 aa7.2□□□□□ -1.26
USP3-220ENST00000561381 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 C1orf196B1AJZ1 125 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 COX7A2LO14548 114 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 MALP21145 153 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 SUMO2P61956 95 aaKnown RBP7.19□□□□□ -1.26
USP3-220ENST00000561381 RIGQ13278 110 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 Q6ZRP5 223 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 Q6ZUT4 128 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 FAM210AQ96ND0 272 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 PKIGQ9Y2B9 76 aa7.19□□□□□ -1.26
USP3-220ENST00000561381 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
USP3-220ENST00000561381 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms