RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 SPACA4Q8TDM5 124 aa8.02□□□□□ -1.13
SNX1-209ENST00000559961 ISOC2Q96AB3 205 aa8.02□□□□□ -1.13
SNX1-209ENST00000559961 TMEM18Q96B42 140 aa8.02□□□□□ -1.13
SNX1-209ENST00000559961 KIR2DL4Q99706 377 aa8.02□□□□□ -1.13
SNX1-209ENST00000559961 TMEM242Q9NWH2 141 aa8.02□□□□□ -1.13
SNX1-209ENST00000559961 GVQW2A0A096LPI5 108 aaPredicted RBP8.01□□□□□ -1.13
SNX1-209ENST00000559961 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 C7orf77A4D0Y5 90 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 PANO1I0J062 215 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 CCL25O15444 150 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 SLPIP03973 132 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 TMEM241Q24JQ0 296 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 FAM74A3Q4VXF1 159 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
SNX1-209ENST00000559961 PPP1R2P9O14990 202 aa8□□□□□ -1.13
SNX1-209ENST00000559961 RAB4AP20338 218 aa8□□□□□ -1.13
SNX1-209ENST00000559961 FOXI1Q12951 378 aa8□□□□□ -1.13
SNX1-209ENST00000559961 CD164L2Q6UWJ8 174 aa8□□□□□ -1.13
SNX1-209ENST00000559961 ZNF664Q8N3J9 261 aa8□□□□□ -1.13
SNX1-209ENST00000559961 STPG4Q8N801 248 aa8□□□□□ -1.13
SNX1-209ENST00000559961 NAT8BQ9UHF3 227 aa8□□□□□ -1.13
SNX1-209ENST00000559961 TRBV27A0A0K0K1C4 114 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 C1orf196B1AJZ1 125 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 TCAPO15273 167 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 TSHBP01222 138 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 ESDP10768 282 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 MRPL52Q86TS9 123 aaKnown RBP7.99□□□□□ -1.13
SNX1-209ENST00000559961 AMN1Q8IY45 258 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 PRSS3P2Q8NHM4 247 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
SNX1-209ENST00000559961 PHOX2AO14813 284 aa7.98□□□□□ -1.13
SNX1-209ENST00000559961 S100A8P05109 93 aa7.98□□□□□ -1.13
SNX1-209ENST00000559961 POLR2KP53803 58 aaKnown RBP7.98□□□□□ -1.13
SNX1-209ENST00000559961 CDC42SE2Q9NRR3 84 aa7.98□□□□□ -1.13
SNX1-209ENST00000559961 A0A1B0GW15 77 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 COX7A2LO14548 114 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 APOMO95445 188 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 SRP19P09132 144 aaKnown RBP7.97□□□□□ -1.13
SNX1-209ENST00000559961 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
SNX1-209ENST00000559961 SYCNQ0VAF6 134 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 PEA15Q15121 130 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 ADIRFQ15847 76 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 NUP35Q8NFH5 326 aa7.97□□□□□ -1.13
SNX1-209ENST00000559961 LINC00862A6NCI5 91 aa7.96□□□□□ -1.14
SNX1-209ENST00000559961 F8W036 122 aa7.96□□□□□ -1.14
SNX1-209ENST00000559961 CKS2P33552 79 aa7.96□□□□□ -1.14
SNX1-209ENST00000559961 HNRNPA3P51991 378 aaKnown RBP7.96□□□□□ -1.14
SNX1-209ENST00000559961 NAT8Q9UHE5 227 aa7.96□□□□□ -1.14
SNX1-209ENST00000559961 SMKR1H3BMG3 65 aa7.95□□□□□ -1.14
SNX1-209ENST00000559961 CAMPP49913 170 aa7.95□□□□□ -1.14
SNX1-209ENST00000559961 C20orf78Q9BR46 151 aa7.95□□□□□ -1.14
SNX1-209ENST00000559961 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
SNX1-209ENST00000559961 V9GYV3 84 aa7.95□□□□□ -1.14
SNX1-209ENST00000559961 TRAV13-1A0A0B4J241 112 aa7.94□□□□□ -1.14
SNX1-209ENST00000559961 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
SNX1-209ENST00000559961 GAS8-AS1O95177 125 aa7.94□□□□□ -1.14
SNX1-209ENST00000559961 FAM104BQ5XKR9 115 aa7.94□□□□□ -1.14
SNX1-209ENST00000559961 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
SNX1-209ENST00000559961 A0A096LNI7 61 aa7.93□□□□□ -1.14
SNX1-209ENST00000559961 RPL23P62829 140 aaKnown RBP7.93□□□□□ -1.14
SNX1-209ENST00000559961 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
SNX1-209ENST00000559961 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
SNX1-209ENST00000559961 LINC00526Q96FQ7 95 aa7.93□□□□□ -1.14
SNX1-209ENST00000559961 SMDT1Q9H4I9 107 aa7.93□□□□□ -1.14
SNX1-209ENST00000559961 IGLV4-69A0A075B6H9 119 aa7.92□□□□□ -1.14
SNX1-209ENST00000559961 MRPL51Q4U2R6 128 aaKnown RBP7.92□□□□□ -1.14
SNX1-209ENST00000559961 Q6ZRP5 223 aa7.92□□□□□ -1.14
SNX1-209ENST00000559961 TIMM21Q9BVV7 248 aa7.92□□□□□ -1.14
SNX1-209ENST00000559961 UBE2D4Q9Y2X8 147 aa7.92□□□□□ -1.14
SNX1-209ENST00000559961 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
SNX1-209ENST00000559961 RAB5AP20339 215 aa7.91□□□□□ -1.14
SNX1-209ENST00000559961 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
SNX1-209ENST00000559961 NRACQ8N912 160 aa7.91□□□□□ -1.14
SNX1-209ENST00000559961 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
SNX1-209ENST00000559961 PPBPP02775 128 aa7.9□□□□□ -1.14
SNX1-209ENST00000559961 HBBP68871 147 aa7.9□□□□□ -1.14
SNX1-209ENST00000559961 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
SNX1-209ENST00000559961 SPINK6Q6UWN8 80 aa7.9□□□□□ -1.14
SNX1-209ENST00000559961 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
SNX1-209ENST00000559961 TRBV24-1A0A075B6N3 115 aa7.89□□□□□ -1.15
SNX1-209ENST00000559961 F8WDY8 70 aa7.89□□□□□ -1.15
SNX1-209ENST00000559961 TNFRSF6BO95407 300 aa7.89□□□□□ -1.15
SNX1-209ENST00000559961 PTTG1IPP53801 180 aa7.89□□□□□ -1.15
SNX1-209ENST00000559961 RPL32P62910 135 aaKnown RBP7.89□□□□□ -1.15
SNX1-209ENST00000559961 RPL18AQ02543 176 aaKnown RBP7.89□□□□□ -1.15
SNX1-209ENST00000559961 MRPL54Q6P161 138 aaKnown RBP7.89□□□□□ -1.15
SNX1-209ENST00000559961 SPANXA1Q9NS26 97 aa7.89□□□□□ -1.15
SNX1-209ENST00000559961 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
SNX1-209ENST00000559961 OR10D4PQ8NGN7 298 aa7.88□□□□□ -1.15
SNX1-209ENST00000559961 IMMP2LQ96T52 175 aa7.88□□□□□ -1.15
SNX1-209ENST00000559961 LRP1Q07954 4544 aaKnown RBP7.87□□□□□ -1.15
SNX1-209ENST00000559961 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 D6R8Y8 96 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 MT-ND6P03923 174 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 Q6ZUT4 128 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 LINC01600Q96MT4 127 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
SNX1-209ENST00000559961 TGIF2-C20orf24A0A0A6YYL0 155 aa7.86□□□□□ -1.15
SNX1-209ENST00000559961 NDUFA1O15239 70 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms