RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SS18Q15532 418 aa11.34□□□□□ -0.59
TPM1-218ENST00000559281 ADIRFQ15847 76 aa11.34□□□□□ -0.59
TPM1-218ENST00000559281 HIGD2BQ4VC39 106 aa11.34□□□□□ -0.59
TPM1-218ENST00000559281 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
TPM1-218ENST00000559281 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
TPM1-218ENST00000559281 NAT8Q9UHE5 227 aa11.34□□□□□ -0.59
TPM1-218ENST00000559281 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
TPM1-218ENST00000559281 C7orf77A4D0Y5 90 aa11.33□□□□□ -0.6
TPM1-218ENST00000559281 XCL1P47992 114 aa11.33□□□□□ -0.6
TPM1-218ENST00000559281 FOXI1Q12951 378 aa11.33□□□□□ -0.6
TPM1-218ENST00000559281 GVQW2A0A096LPI5 108 aaPredicted RBP11.32□□□□□ -0.6
TPM1-218ENST00000559281 KIR2DL4Q99706 377 aa11.32□□□□□ -0.6
TPM1-218ENST00000559281 CDC42SE2Q9NRR3 84 aa11.32□□□□□ -0.6
TPM1-218ENST00000559281 A0A087WYN8 130 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 A0A1B0GW15 77 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 CCL25O15444 150 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
TPM1-218ENST00000559281 COX6A2Q02221 97 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 ZNF664Q8N3J9 261 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 SPACA4Q8TDM5 124 aa11.31□□□□□ -0.6
TPM1-218ENST00000559281 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
TPM1-218ENST00000559281 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
TPM1-218ENST00000559281 CHTF8P0CG12 524 aa11.3□□□□□ -0.6
TPM1-218ENST00000559281 PKIGQ9Y2B9 76 aa11.3□□□□□ -0.6
TPM1-218ENST00000559281 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 LINC00862A6NCI5 91 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 C9JQL5 133 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 CD164L2Q6UWJ8 174 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 TMEM18Q96B42 140 aa11.29□□□□□ -0.6
TPM1-218ENST00000559281 CSDC2Q9Y534 153 aaKnown RBP11.29□□□□□ -0.6
TPM1-218ENST00000559281 S100A8P05109 93 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 CAMPP49913 170 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 SERTAD4-AS1Q5TG53 156 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 NRACQ8N912 160 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 C7orf33Q8WU49 177 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
TPM1-218ENST00000559281 C1orf196B1AJZ1 125 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 TCAPO15273 167 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 MAJINQ3KP22 176 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
TPM1-218ENST00000559281 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 C20orf78Q9BR46 151 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
TPM1-218ENST00000559281 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
TPM1-218ENST00000559281 CKS2P33552 79 aa11.26□□□□□ -0.61
TPM1-218ENST00000559281 SRSF3P84103 164 aaKnown RBP11.26□□□□□ -0.61
TPM1-218ENST00000559281 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
TPM1-218ENST00000559281 F8W036 122 aa11.25□□□□□ -0.61
TPM1-218ENST00000559281 TRBV24-1A0A075B6N3 115 aa11.24□□□□□ -0.61
TPM1-218ENST00000559281 MALP21145 153 aa11.24□□□□□ -0.61
TPM1-218ENST00000559281 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
TPM1-218ENST00000559281 Q6ZRU5 148 aa11.24□□□□□ -0.61
TPM1-218ENST00000559281 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
TPM1-218ENST00000559281 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
TPM1-218ENST00000559281 HBBP68871 147 aa11.23□□□□□ -0.61
TPM1-218ENST00000559281 STPG4Q8N801 248 aa11.23□□□□□ -0.61
TPM1-218ENST00000559281 CARD19Q96LW7 228 aa11.23□□□□□ -0.61
TPM1-218ENST00000559281 TIMM21Q9BVV7 248 aa11.23□□□□□ -0.61
TPM1-218ENST00000559281 COX7A2LO14548 114 aa11.22□□□□□ -0.61
TPM1-218ENST00000559281 SYCNQ0VAF6 134 aa11.22□□□□□ -0.61
TPM1-218ENST00000559281 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.61
TPM1-218ENST00000559281 TNFRSF6BO95407 300 aa11.21□□□□□ -0.61
TPM1-218ENST00000559281 PPBPP02775 128 aa11.21□□□□□ -0.61
TPM1-218ENST00000559281 MRPL54Q6P161 138 aaKnown RBP11.21□□□□□ -0.61
TPM1-218ENST00000559281 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
TPM1-218ENST00000559281 A0A096LNI7 61 aa11.2□□□□□ -0.62
TPM1-218ENST00000559281 PHOX2AO14813 284 aa11.2□□□□□ -0.62
TPM1-218ENST00000559281 D6R8Y8 96 aa11.19□□□□□ -0.62
TPM1-218ENST00000559281 APOMO95445 188 aa11.19□□□□□ -0.62
TPM1-218ENST00000559281 A0A1B0GXF2 115 aa11.18□□□□□ -0.62
TPM1-218ENST00000559281 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
TPM1-218ENST00000559281 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
TPM1-218ENST00000559281 IGLV4-69A0A075B6H9 119 aa11.17□□□□□ -0.62
TPM1-218ENST00000559281 Q6ZUT4 128 aa11.17□□□□□ -0.62
TPM1-218ENST00000559281 ATP5L2Q7Z4Y8 100 aa11.17□□□□□ -0.62
TPM1-218ENST00000559281 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
TPM1-218ENST00000559281 RAB5AP20339 215 aa11.16□□□□□ -0.62
TPM1-218ENST00000559281 RAB14P61106 215 aa11.16□□□□□ -0.62
TPM1-218ENST00000559281 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
TPM1-218ENST00000559281 ORMDL3Q8N138 153 aa11.16□□□□□ -0.62
TPM1-218ENST00000559281 CAMK2N2Q96S95 79 aa11.16□□□□□ -0.62
TPM1-218ENST00000559281 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
TPM1-218ENST00000559281 NPYP01303 97 aa11.15□□□□□ -0.62
TPM1-218ENST00000559281 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.62
TPM1-218ENST00000559281 TMEM136Q6ZRR5 245 aa11.15□□□□□ -0.62
TPM1-218ENST00000559281 C2orf48Q96LS8 159 aa11.15□□□□□ -0.62
TPM1-218ENST00000559281 LRP1Q07954 4544 aaKnown RBP11.14□□□□□ -0.63
TPM1-218ENST00000559281 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
TPM1-218ENST00000559281 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
TPM1-218ENST00000559281 PTTG1IPP53801 180 aa11.13□□□□□ -0.63
TPM1-218ENST00000559281 GAGE2BQ13066 116 aa11.13□□□□□ -0.63
TPM1-218ENST00000559281 PRELID3AQ96N28 172 aa11.13□□□□□ -0.63
TPM1-218ENST00000559281 MT-ND4LP03901 98 aa11.12□□□□□ -0.63
TPM1-218ENST00000559281 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
TPM1-218ENST00000559281 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
TPM1-218ENST00000559281 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
TPM1-218ENST00000559281 SPAG11BQ08648 103 aa11.11□□□□□ -0.63
TPM1-218ENST00000559281 PLA2G2DQ9UNK4 145 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms