RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 FGF6P10767 208 aa8.74□□□□□ -1.01
SLIRP-210ENST00000557431 XCL1P47992 114 aa8.74□□□□□ -1.01
SLIRP-210ENST00000557431 GAS8-AS1O95177 125 aa8.73□□□□□ -1.01
SLIRP-210ENST00000557431 RPL23P62829 140 aaKnown RBP8.73□□□□□ -1.01
SLIRP-210ENST00000557431 TSKUQ8WUA8 353 aa8.73□□□□□ -1.01
SLIRP-210ENST00000557431 ISOC2Q96AB3 205 aa8.73□□□□□ -1.01
SLIRP-210ENST00000557431 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
SLIRP-210ENST00000557431 FAM231BA6NCW3 169 aa8.72□□□□□ -1.01
SLIRP-210ENST00000557431 CCL25O15444 150 aa8.72□□□□□ -1.01
SLIRP-210ENST00000557431 APCSP02743 223 aa8.72□□□□□ -1.01
SLIRP-210ENST00000557431 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
SLIRP-210ENST00000557431 V9GYV3 84 aa8.72□□□□□ -1.01
SLIRP-210ENST00000557431 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
SLIRP-210ENST00000557431 HIGD1CA8MV81 97 aa8.71□□□□□ -1.02
SLIRP-210ENST00000557431 SMIM15Q7Z3B0 74 aa8.71□□□□□ -1.02
SLIRP-210ENST00000557431 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
SLIRP-210ENST00000557431 SRSF9Q13242 221 aaKnown RBP eCLIP8.7□□□□□ -1.02
SLIRP-210ENST00000557431 ADIRFQ15847 76 aa8.7□□□□□ -1.02
SLIRP-210ENST00000557431 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SLIRP-210ENST00000557431 OR5A1Q8NGJ0 315 aa8.7□□□□□ -1.02
SLIRP-210ENST00000557431 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
SLIRP-210ENST00000557431 LINC00959A0A1B0GUT2 108 aa8.69□□□□□ -1.02
SLIRP-210ENST00000557431 A0A1B0GUT8 65 aa8.69□□□□□ -1.02
SLIRP-210ENST00000557431 RAB14P61106 215 aa8.69□□□□□ -1.02
SLIRP-210ENST00000557431 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
SLIRP-210ENST00000557431 TMEM242Q9NWH2 141 aa8.69□□□□□ -1.02
SLIRP-210ENST00000557431 Q6ZRP5 223 aa8.68□□□□□ -1.02
SLIRP-210ENST00000557431 IGHV1-58A0A0C4DH39 117 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 NCR2O95944 276 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 PMCHP20382 165 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 TMEM191AQ9H0A3 160 aa8.67□□□□□ -1.02
SLIRP-210ENST00000557431 TSHBP01222 138 aa8.66□□□□□ -1.02
SLIRP-210ENST00000557431 PTTG1IPP53801 180 aa8.66□□□□□ -1.02
SLIRP-210ENST00000557431 RNASE13Q5GAN3 156 aaKnown RBP8.66□□□□□ -1.02
SLIRP-210ENST00000557431 CLLU1Q5K131 121 aa8.66□□□□□ -1.02
SLIRP-210ENST00000557431 BTF3L4Q96K17 158 aa8.66□□□□□ -1.02
SLIRP-210ENST00000557431 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
SLIRP-210ENST00000557431 IGLV4-69A0A075B6H9 119 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 SMIM27A0A1W2PRY6 76 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 H7C423 109 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 I3L3M4 83 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 ESDP10768 282 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 IFITM2Q01629 132 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 RIGQ13278 110 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 TMEM101Q96IK0 257 aa8.65□□□□□ -1.02
SLIRP-210ENST00000557431 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
SLIRP-210ENST00000557431 RAB4AP20338 218 aa8.64□□□□□ -1.03
SLIRP-210ENST00000557431 CAMPP49913 170 aa8.64□□□□□ -1.03
SLIRP-210ENST00000557431 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
SLIRP-210ENST00000557431 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 SS18Q15532 418 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
SLIRP-210ENST00000557431 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 CDC42SE2Q9NRR3 84 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
SLIRP-210ENST00000557431 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
SLIRP-210ENST00000557431 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
SLIRP-210ENST00000557431 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
SLIRP-210ENST00000557431 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
SLIRP-210ENST00000557431 C9orf116Q5BN46 136 aaPredicted RBP8.61□□□□□ -1.03
SLIRP-210ENST00000557431 ZNF664Q8N3J9 261 aa8.61□□□□□ -1.03
SLIRP-210ENST00000557431 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
SLIRP-210ENST00000557431 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
SLIRP-210ENST00000557431 A0A1B0GW15 77 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
SLIRP-210ENST00000557431 MT-ND6P03923 174 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 MALP21145 153 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 PNRC1Q12796 327 aaPredicted RBP8.6□□□□□ -1.03
SLIRP-210ENST00000557431 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
SLIRP-210ENST00000557431 C7orf77A4D0Y5 90 aa8.59□□□□□ -1.03
SLIRP-210ENST00000557431 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
SLIRP-210ENST00000557431 POLR2KP53803 58 aaKnown RBP8.59□□□□□ -1.03
SLIRP-210ENST00000557431 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
SLIRP-210ENST00000557431 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
SLIRP-210ENST00000557431 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
SLIRP-210ENST00000557431 TRAV13-1A0A0B4J241 112 aa8.58□□□□□ -1.04
SLIRP-210ENST00000557431 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
SLIRP-210ENST00000557431 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
SLIRP-210ENST00000557431 MRPL52Q86TS9 123 aaKnown RBP8.58□□□□□ -1.04
SLIRP-210ENST00000557431 TRBV27A0A0K0K1C4 114 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 A0A1B0GXF2 115 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 COX7A2LO14548 114 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 APOMO95445 188 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 PPP1R17O96001 155 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 S100A8P05109 93 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 HBBP68871 147 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 UQCC3Q6UW78 93 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 Q6ZUT4 128 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 NRACQ8N912 160 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 ANAPC16Q96DE5 110 aa8.57□□□□□ -1.04
SLIRP-210ENST00000557431 FAM168BA1KXE4 195 aa8.56□□□□□ -1.04
SLIRP-210ENST00000557431 LINC00862A6NCI5 91 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms