RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 TSHBP01222 138 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 ESDP10768 282 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 TAGLN2P37802 199 aaKnown RBP8.31□□□□□ -1.08
TGFB3-204ENST00000556285 PRR3P79522 188 aaKnown RBP8.31□□□□□ -1.08
TGFB3-204ENST00000556285 SMIM15Q7Z3B0 74 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 TMEM242Q9NWH2 141 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
TGFB3-204ENST00000556285 A8MWL6 223 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 CEBPGP53567 150 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 CT83Q5H943 113 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 TEX261Q6UWH6 196 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 LPAP08519 4548 aa8.29□□□□□ -1.08
TGFB3-204ENST00000556285 TMEM250H0YL14 139 aa8.28□□□□□ -1.08
TGFB3-204ENST00000556285 H3BS24 57 aa8.28□□□□□ -1.08
TGFB3-204ENST00000556285 ZNF25P17030 456 aaPredicted RBP8.28□□□□□ -1.08
TGFB3-204ENST00000556285 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
TGFB3-204ENST00000556285 ST20Q9HBF5 79 aa8.28□□□□□ -1.08
TGFB3-204ENST00000556285 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
TGFB3-204ENST00000556285 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
TGFB3-204ENST00000556285 POLR2KP53803 58 aaKnown RBP8.27□□□□□ -1.09
TGFB3-204ENST00000556285 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
TGFB3-204ENST00000556285 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
TGFB3-204ENST00000556285 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
TGFB3-204ENST00000556285 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 RAB4AP20338 218 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 MRPL52Q86TS9 123 aaKnown RBP8.26□□□□□ -1.09
TGFB3-204ENST00000556285 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 MRAP2Q96G30 205 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 CARD19Q96LW7 228 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 TMEM191AQ9H0A3 160 aa8.26□□□□□ -1.09
TGFB3-204ENST00000556285 A0A1B0GUT8 65 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 BLOC1S1P78537 153 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 SS18Q15532 418 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
TGFB3-204ENST00000556285 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 ZNF664Q8N3J9 261 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 TSKUQ8WUA8 353 aa8.25□□□□□ -1.09
TGFB3-204ENST00000556285 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
TGFB3-204ENST00000556285 CD164L2Q6UWJ8 174 aa8.24□□□□□ -1.09
TGFB3-204ENST00000556285 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
TGFB3-204ENST00000556285 SMIM7Q9BQ49 75 aa8.24□□□□□ -1.09
TGFB3-204ENST00000556285 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
TGFB3-204ENST00000556285 C7orf77A4D0Y5 90 aa8.23□□□□□ -1.09
TGFB3-204ENST00000556285 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
TGFB3-204ENST00000556285 SRSF9Q13242 221 aaKnown RBP eCLIP8.23□□□□□ -1.09
TGFB3-204ENST00000556285 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 CAMPP49913 170 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 SPINK6Q6UWN8 80 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 AKAP14Q86UN6 197 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 NRACQ8N912 160 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 EIF5A2Q9GZV4 153 aaKnown RBP8.22□□□□□ -1.09
TGFB3-204ENST00000556285 OSTCQ9NRP0 149 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 LINC00474Q9P2X8 69 aa8.22□□□□□ -1.09
TGFB3-204ENST00000556285 A0A1W2PNN7 141 aa8.21□□□□□ -1.1
TGFB3-204ENST00000556285 ZNF727A8MUV8 499 aa8.21□□□□□ -1.1
TGFB3-204ENST00000556285 SRP19P09132 144 aaKnown RBP8.21□□□□□ -1.1
TGFB3-204ENST00000556285 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
TGFB3-204ENST00000556285 UBE2D4Q9Y2X8 147 aa8.21□□□□□ -1.1
TGFB3-204ENST00000556285 V9GYV3 84 aa8.21□□□□□ -1.1
TGFB3-204ENST00000556285 VCYO14598 125 aa8.2□□□□□ -1.1
TGFB3-204ENST00000556285 FCER1GP30273 86 aa8.2□□□□□ -1.1
TGFB3-204ENST00000556285 NUP35Q8NFH5 326 aa8.2□□□□□ -1.1
TGFB3-204ENST00000556285 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
TGFB3-204ENST00000556285 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 COX7A2LO14548 114 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
TGFB3-204ENST00000556285 MRPL51Q4U2R6 128 aaKnown RBP8.19□□□□□ -1.1
TGFB3-204ENST00000556285 Q6ZRP5 223 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 Q6ZUT4 128 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 C5orf38Q86SI9 138 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 FAM210AQ96ND0 272 aa8.19□□□□□ -1.1
TGFB3-204ENST00000556285 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 MALP21145 153 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 RIGQ13278 110 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 ISOC2Q96AB3 205 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
TGFB3-204ENST00000556285 CSDC2Q9Y534 153 aaKnown RBP8.18□□□□□ -1.1
TGFB3-204ENST00000556285 C9JQL5 133 aa8.17□□□□□ -1.1
TGFB3-204ENST00000556285 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.17□□□□□ -1.1
TGFB3-204ENST00000556285 FAM104AQ969W3 186 aa8.17□□□□□ -1.1
TGFB3-204ENST00000556285 OPRPNQ99935 248 aaPredicted RBP8.17□□□□□ -1.1
TGFB3-204ENST00000556285 APOMO95445 188 aa8.16□□□□□ -1.1
TGFB3-204ENST00000556285 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
TGFB3-204ENST00000556285 RPL39P62891 51 aaKnown RBP8.16□□□□□ -1.1
TGFB3-204ENST00000556285 C9orf116Q5BN46 136 aaPredicted RBP8.16□□□□□ -1.1
TGFB3-204ENST00000556285 FAM104BQ5XKR9 115 aa8.16□□□□□ -1.1
TGFB3-204ENST00000556285 RPL18AQ02543 176 aaKnown RBP8.15□□□□□ -1.1
TGFB3-204ENST00000556285 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
TGFB3-204ENST00000556285 PHF5AQ7RTV0 110 aaKnown RBP8.15□□□□□ -1.1
TGFB3-204ENST00000556285 KIR2DL4Q99706 377 aa8.15□□□□□ -1.1
TGFB3-204ENST00000556285 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
TGFB3-204ENST00000556285 PSORS1C2Q9UIG4 136 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms