RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 FAM210AQ96ND0 272 aa11.96□□□□□ -0.49
FOXN3-211ENST00000555855 MT-ND6P03923 174 aa11.95□□□□□ -0.5
FOXN3-211ENST00000555855 MALP21145 153 aa11.95□□□□□ -0.5
FOXN3-211ENST00000555855 CAMPP49913 170 aa11.95□□□□□ -0.5
FOXN3-211ENST00000555855 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
FOXN3-211ENST00000555855 MRAP2Q96G30 205 aa11.95□□□□□ -0.5
FOXN3-211ENST00000555855 RNASE7Q9H1E1 156 aaKnown RBP11.95□□□□□ -0.5
FOXN3-211ENST00000555855 TRBV6-5A0A0K0K1A5 114 aa11.94□□□□□ -0.5
FOXN3-211ENST00000555855 ESDP10768 282 aa11.94□□□□□ -0.5
FOXN3-211ENST00000555855 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
FOXN3-211ENST00000555855 ST20Q9HBF5 79 aa11.94□□□□□ -0.5
FOXN3-211ENST00000555855 CDC42SE2Q9NRR3 84 aa11.94□□□□□ -0.5
FOXN3-211ENST00000555855 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
FOXN3-211ENST00000555855 BCL2P10415 239 aa11.93□□□□□ -0.5
FOXN3-211ENST00000555855 OCC1Q8TAD7 63 aa11.93□□□□□ -0.5
FOXN3-211ENST00000555855 IGLV4-69A0A075B6H9 119 aa11.92□□□□□ -0.5
FOXN3-211ENST00000555855 PSORS1C2Q9UIG4 136 aa11.92□□□□□ -0.5
FOXN3-211ENST00000555855 C1orf196B1AJZ1 125 aa11.91□□□□□ -0.5
FOXN3-211ENST00000555855 TSHBP01222 138 aa11.91□□□□□ -0.5
FOXN3-211ENST00000555855 TAGLN2P37802 199 aaKnown RBP11.91□□□□□ -0.5
FOXN3-211ENST00000555855 MRPL52Q86TS9 123 aaKnown RBP11.91□□□□□ -0.5
FOXN3-211ENST00000555855 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
FOXN3-211ENST00000555855 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
FOXN3-211ENST00000555855 K7EN84 100 aa11.9□□□□□ -0.5
FOXN3-211ENST00000555855 COX7A2LO14548 114 aa11.9□□□□□ -0.5
FOXN3-211ENST00000555855 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
FOXN3-211ENST00000555855 C9orf116Q5BN46 136 aaPredicted RBP11.9□□□□□ -0.5
FOXN3-211ENST00000555855 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
FOXN3-211ENST00000555855 BORCS7Q96B45 105 aa11.9□□□□□ -0.5
FOXN3-211ENST00000555855 A8MWL6 223 aa11.89□□□□□ -0.51
FOXN3-211ENST00000555855 APOMO95445 188 aa11.89□□□□□ -0.51
FOXN3-211ENST00000555855 NUP35Q8NFH5 326 aa11.89□□□□□ -0.51
FOXN3-211ENST00000555855 C7orf77A4D0Y5 90 aa11.88□□□□□ -0.51
FOXN3-211ENST00000555855 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
FOXN3-211ENST00000555855 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
FOXN3-211ENST00000555855 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
FOXN3-211ENST00000555855 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
FOXN3-211ENST00000555855 DIRC1Q969H9 104 aa11.86□□□□□ -0.51
FOXN3-211ENST00000555855 LPAP08519 4548 aa11.86□□□□□ -0.51
FOXN3-211ENST00000555855 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
FOXN3-211ENST00000555855 PHF5AQ7RTV0 110 aaKnown RBP11.85□□□□□ -0.51
FOXN3-211ENST00000555855 PRR26Q8N8Z3 221 aa11.85□□□□□ -0.51
FOXN3-211ENST00000555855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
FOXN3-211ENST00000555855 VCYO14598 125 aa11.84□□□□□ -0.51
FOXN3-211ENST00000555855 FCER1GP30273 86 aa11.84□□□□□ -0.51
FOXN3-211ENST00000555855 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
FOXN3-211ENST00000555855 TSKUQ8WUA8 353 aa11.84□□□□□ -0.51
FOXN3-211ENST00000555855 RNF151Q2KHN1 245 aa11.83□□□□□ -0.52
FOXN3-211ENST00000555855 C5orf38Q86SI9 138 aa11.83□□□□□ -0.52
FOXN3-211ENST00000555855 OPRPNQ99935 248 aaPredicted RBP11.83□□□□□ -0.52
FOXN3-211ENST00000555855 TMEM191AQ9H0A3 160 aa11.83□□□□□ -0.52
FOXN3-211ENST00000555855 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
FOXN3-211ENST00000555855 TRAV13-1A0A0B4J241 112 aa11.82□□□□□ -0.52
FOXN3-211ENST00000555855 IGLV7-43P04211 117 aa11.82□□□□□ -0.52
FOXN3-211ENST00000555855 A0A087WZ39 114 aa11.81□□□□□ -0.52
FOXN3-211ENST00000555855 A0A1B0GUT8 65 aa11.81□□□□□ -0.52
FOXN3-211ENST00000555855 RAB4AP20338 218 aa11.81□□□□□ -0.52
FOXN3-211ENST00000555855 CT83Q5H943 113 aa11.81□□□□□ -0.52
FOXN3-211ENST00000555855 SPAG11BQ08648 103 aa11.8□□□□□ -0.52
FOXN3-211ENST00000555855 IMMP2LQ96T52 175 aa11.8□□□□□ -0.52
FOXN3-211ENST00000555855 PPP1R17O96001 155 aa11.79□□□□□ -0.52
FOXN3-211ENST00000555855 RNASE13Q5GAN3 156 aaKnown RBP11.79□□□□□ -0.52
FOXN3-211ENST00000555855 TMEM18Q96B42 140 aa11.79□□□□□ -0.52
FOXN3-211ENST00000555855 KIR2DL4Q99706 377 aa11.79□□□□□ -0.52
FOXN3-211ENST00000555855 UBE2D4Q9Y2X8 147 aa11.79□□□□□ -0.52
FOXN3-211ENST00000555855 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
FOXN3-211ENST00000555855 IGLV1-50A0A075B6I6 118 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 HIGD1CA8MV81 97 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 F8WDY8 70 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 H0Y9J4 135 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 SLC51BQ86UW2 128 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 AMN1Q8IY45 258 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 OR10D4PQ8NGN7 298 aa11.77□□□□□ -0.53
FOXN3-211ENST00000555855 CEBPGP53567 150 aa11.76□□□□□ -0.53
FOXN3-211ENST00000555855 MRPL35Q9NZE8 188 aaKnown RBP11.76□□□□□ -0.53
FOXN3-211ENST00000555855 SMKR1H3BMG3 65 aa11.75□□□□□ -0.53
FOXN3-211ENST00000555855 SUMO2P61956 95 aaKnown RBP11.75□□□□□ -0.53
FOXN3-211ENST00000555855 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
FOXN3-211ENST00000555855 NDUFA1O15239 70 aa11.74□□□□□ -0.53
FOXN3-211ENST00000555855 RIGQ13278 110 aa11.74□□□□□ -0.53
FOXN3-211ENST00000555855 PRR4Q16378 134 aa11.74□□□□□ -0.53
FOXN3-211ENST00000555855 ORAOV1Q8WV07 137 aa11.74□□□□□ -0.53
FOXN3-211ENST00000555855 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
FOXN3-211ENST00000555855 PPP1R2P9O14990 202 aa11.73□□□□□ -0.53
FOXN3-211ENST00000555855 UBE2D1P51668 147 aa11.73□□□□□ -0.53
FOXN3-211ENST00000555855 Q6ZUT4 128 aa11.73□□□□□ -0.53
FOXN3-211ENST00000555855 A0A0U1RQV1 116 aa11.71□□□□□ -0.53
FOXN3-211ENST00000555855 FAM168BA1KXE4 195 aa11.71□□□□□ -0.53
FOXN3-211ENST00000555855 BLOC1S1P78537 153 aa11.71□□□□□ -0.53
FOXN3-211ENST00000555855 NRACQ8N912 160 aa11.71□□□□□ -0.53
FOXN3-211ENST00000555855 OSTCQ9NRP0 149 aa11.71□□□□□ -0.53
FOXN3-211ENST00000555855 TLX1NBP0CAT3 122 aa11.7□□□□□ -0.54
FOXN3-211ENST00000555855 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
FOXN3-211ENST00000555855 UBE2BP63146 152 aa11.7□□□□□ -0.54
FOXN3-211ENST00000555855 GAGE2EQ4V326 116 aa11.7□□□□□ -0.54
FOXN3-211ENST00000555855 FAM19A5Q7Z5A7 132 aaPredicted RBP11.7□□□□□ -0.54
FOXN3-211ENST00000555855 GAGE2DQ9UEU5 116 aa11.7□□□□□ -0.54
FOXN3-211ENST00000555855 TCAPO15273 167 aa11.69□□□□□ -0.54
FOXN3-211ENST00000555855 UNQ6190/PRO20217Q6UXQ8 127 aa11.69□□□□□ -0.54
FOXN3-211ENST00000555855 KRTAP11-1Q8IUC1 163 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms