RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 FAM231DQ6ZW35 169 aa7.17□□□□□ -1.26
NEK3-204ENST00000552973 IGHV1-58A0A0C4DH39 117 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 SS18Q15532 418 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 ALKAL2Q6UX46 152 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 BORCS7Q96B45 105 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 MRAP2Q96G30 205 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 LINC01600Q96MT4 127 aa7.16□□□□□ -1.26
NEK3-204ENST00000552973 TMEM250H0YL14 139 aa7.15□□□□□ -1.26
NEK3-204ENST00000552973 SMKR1H3BMG3 65 aa7.15□□□□□ -1.26
NEK3-204ENST00000552973 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.26
NEK3-204ENST00000552973 AMN1Q8IY45 258 aa7.15□□□□□ -1.26
NEK3-204ENST00000552973 CDC42SE2Q9NRR3 84 aa7.15□□□□□ -1.26
NEK3-204ENST00000552973 A0A1B0GUT8 65 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 HIGD1CA8MV81 97 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 RAB4AP20338 218 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
NEK3-204ENST00000552973 BLOC1S1P78537 153 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 SYCNQ0VAF6 134 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 GAGE2BQ13066 116 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 RNASE13Q5GAN3 156 aaKnown RBP7.14□□□□□ -1.27
NEK3-204ENST00000552973 CD164L2Q6UWJ8 174 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 TMEM191AQ9H0A3 160 aa7.14□□□□□ -1.27
NEK3-204ENST00000552973 IGLV4-69A0A075B6H9 119 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 C7orf77A4D0Y5 90 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 CT83Q5H943 113 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
NEK3-204ENST00000552973 LINC01551Q86U37 167 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 TSKUQ8WUA8 353 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 EIF5A2Q9GZV4 153 aaKnown RBP7.13□□□□□ -1.27
NEK3-204ENST00000552973 LINC00474Q9P2X8 69 aa7.13□□□□□ -1.27
NEK3-204ENST00000552973 A0A0J9YXV3 536 aa7.12□□□□□ -1.27
NEK3-204ENST00000552973 TRBV27A0A0K0K1C4 114 aa7.12□□□□□ -1.27
NEK3-204ENST00000552973 MALP21145 153 aa7.12□□□□□ -1.27
NEK3-204ENST00000552973 SPINK6Q6UWN8 80 aa7.12□□□□□ -1.27
NEK3-204ENST00000552973 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
NEK3-204ENST00000552973 TRAV13-1A0A0B4J241 112 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 A0A1W2PNN7 141 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 ZNF727A8MUV8 499 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 VCYO14598 125 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 FCER1GP30273 86 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 CAMPP49913 170 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 PTTG1IPP53801 180 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
NEK3-204ENST00000552973 Q6ZRP5 223 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 OSTCQ9NRP0 149 aa7.11□□□□□ -1.27
NEK3-204ENST00000552973 TNXBP22105 4242 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 hCG_2014768A0A024R1R8 64 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 A6NJY4 79 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 COX7A2LO14548 114 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 C5orf38Q86SI9 138 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 ISOC2Q96AB3 205 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 PKIGQ9Y2B9 76 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 UBE2D4Q9Y2X8 147 aa7.1□□□□□ -1.27
NEK3-204ENST00000552973 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 C1orf196B1AJZ1 125 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 SRP19P09132 144 aaKnown RBP7.09□□□□□ -1.27
NEK3-204ENST00000552973 SUMO2P61956 95 aaKnown RBP7.09□□□□□ -1.27
NEK3-204ENST00000552973 RIGQ13278 110 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 AKAP14Q86UN6 197 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 NRACQ8N912 160 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
NEK3-204ENST00000552973 V9GYV3 84 aa7.09□□□□□ -1.27
NEK3-204ENST00000552973 RPL18AQ02543 176 aaKnown RBP7.08□□□□□ -1.28
NEK3-204ENST00000552973 Q6ZUT4 128 aa7.08□□□□□ -1.28
NEK3-204ENST00000552973 FAM210AQ96ND0 272 aa7.08□□□□□ -1.28
NEK3-204ENST00000552973 LRP2P98164 4655 aa7.08□□□□□ -1.28
NEK3-204ENST00000552973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.07□□□□□ -1.28
NEK3-204ENST00000552973 APOMO95445 188 aa7.07□□□□□ -1.28
NEK3-204ENST00000552973 MRPL51Q4U2R6 128 aaKnown RBP7.07□□□□□ -1.28
NEK3-204ENST00000552973 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
NEK3-204ENST00000552973 KIR2DL4Q99706 377 aa7.07□□□□□ -1.28
NEK3-204ENST00000552973 CSDC2Q9Y534 153 aaKnown RBP7.07□□□□□ -1.28
NEK3-204ENST00000552973 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
NEK3-204ENST00000552973 NAT8BQ9UHF3 227 aa7.06□□□□□ -1.28
NEK3-204ENST00000552973 PPP1R17O96001 155 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 MT-ND6P03923 174 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 RPL23P62829 140 aaKnown RBP7.05□□□□□ -1.28
NEK3-204ENST00000552973 RPL39P62891 51 aaKnown RBP7.05□□□□□ -1.28
NEK3-204ENST00000552973 SPAG11BQ08648 103 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 SMAGPQ0VAQ4 97 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 TMEM241Q24JQ0 296 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 FAM104BQ5XKR9 115 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
NEK3-204ENST00000552973 PPP1R2P9O14990 202 aa7.04□□□□□ -1.28
NEK3-204ENST00000552973 CKS2P33552 79 aa7.04□□□□□ -1.28
NEK3-204ENST00000552973 ADIRFQ15847 76 aa7.04□□□□□ -1.28
NEK3-204ENST00000552973 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
NEK3-204ENST00000552973 TMEM18Q96B42 140 aa7.04□□□□□ -1.28
NEK3-204ENST00000552973 C9JQL5 133 aa7.03□□□□□ -1.28
NEK3-204ENST00000552973 FAM74A3Q4VXF1 159 aa7.03□□□□□ -1.28
NEK3-204ENST00000552973 ORAOV1Q8WV07 137 aa7.03□□□□□ -1.28
NEK3-204ENST00000552973 FAM104AQ969W3 186 aa7.03□□□□□ -1.28
NEK3-204ENST00000552973 TIMM21Q9BVV7 248 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms