RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
CDX2-202ENST00000548877 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
CDX2-202ENST00000548877 PTH2Q96A98 100 aa8.85□□□□□ -0.99
CDX2-202ENST00000548877 GTSF1LQ9H1H1 148 aa8.85□□□□□ -0.99
CDX2-202ENST00000548877 LRP2P98164 4655 aa8.85□□□□□ -0.99
CDX2-202ENST00000548877 LECT2O14960 151 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 S100A12P80511 92 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 RHOHQ15669 191 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 Q8N976 141 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 PRADC1Q9BSG0 188 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 HSPB8Q9UJY1 196 aa8.84□□□□□ -0.99
CDX2-202ENST00000548877 NIT2Q9NQR4 276 aa8.83□□□□□ -1
CDX2-202ENST00000548877 TNXBP22105 4242 aa8.83□□□□□ -1
CDX2-202ENST00000548877 RNF213Q63HN8 5207 aa8.83□□□□□ -1
CDX2-202ENST00000548877 PRSS47A8MTI9 375 aa8.82□□□□□ -1
CDX2-202ENST00000548877 K7EMI3 77 aa8.82□□□□□ -1
CDX2-202ENST00000548877 TNFRSF6BO95407 300 aa8.82□□□□□ -1
CDX2-202ENST00000548877 SCGB1D1O95968 90 aa8.82□□□□□ -1
CDX2-202ENST00000548877 Q8N3U1 123 aa8.82□□□□□ -1
CDX2-202ENST00000548877 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
CDX2-202ENST00000548877 BAALCQ8WXS3 180 aa8.82□□□□□ -1
CDX2-202ENST00000548877 C20orf78Q9BR46 151 aa8.82□□□□□ -1
CDX2-202ENST00000548877 LEPROTL1O95214 131 aa8.81□□□□□ -1
CDX2-202ENST00000548877 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
CDX2-202ENST00000548877 CFAP126Q5VTH2 177 aa8.81□□□□□ -1
CDX2-202ENST00000548877 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
CDX2-202ENST00000548877 IGHV1-24A0A0C4DH33 117 aa8.8□□□□□ -1
CDX2-202ENST00000548877 LINC01546A6NGU7 62 aa8.8□□□□□ -1
CDX2-202ENST00000548877 A8MWV9 139 aa8.8□□□□□ -1
CDX2-202ENST00000548877 NCR2O95944 276 aa8.8□□□□□ -1
CDX2-202ENST00000548877 NPYP01303 97 aa8.8□□□□□ -1
CDX2-202ENST00000548877 MGPP08493 103 aa8.8□□□□□ -1
CDX2-202ENST00000548877 LINC00694P0DN24 101 aa8.8□□□□□ -1
CDX2-202ENST00000548877 IFI27P40305 119 aaPredicted RBP8.8□□□□□ -1
CDX2-202ENST00000548877 KRTDAPP60985 99 aa8.8□□□□□ -1
CDX2-202ENST00000548877 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
CDX2-202ENST00000548877 ZNF876PQ49A33 203 aa8.8□□□□□ -1
CDX2-202ENST00000548877 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
CDX2-202ENST00000548877 FAM19A2Q8N3H0 131 aa8.8□□□□□ -1
CDX2-202ENST00000548877 Q8N8P6 123 aa8.8□□□□□ -1
CDX2-202ENST00000548877 URB1-AS1Q96HZ7 61 aa8.8□□□□□ -1
CDX2-202ENST00000548877 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
CDX2-202ENST00000548877 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
CDX2-202ENST00000548877 C20orf202A1L168 122 aa8.79□□□□□ -1
CDX2-202ENST00000548877 SMKR1H3BMG3 65 aa8.79□□□□□ -1
CDX2-202ENST00000548877 H7C1H1 209 aa8.79□□□□□ -1
CDX2-202ENST00000548877 HBDP02042 147 aa8.79□□□□□ -1
CDX2-202ENST00000548877 G0S2P27469 103 aa8.79□□□□□ -1
CDX2-202ENST00000548877 RPL32P62910 135 aaKnown RBP8.79□□□□□ -1
CDX2-202ENST00000548877 RMI2Q96E14 147 aa8.79□□□□□ -1
CDX2-202ENST00000548877 LINC01549A6NIU2 74 aa8.78□□□□□ -1
CDX2-202ENST00000548877 RHODO00212 210 aa8.78□□□□□ -1
CDX2-202ENST00000548877 PMCHL1Q16048 86 aa8.78□□□□□ -1
CDX2-202ENST00000548877 NRACQ8N912 160 aa8.78□□□□□ -1
CDX2-202ENST00000548877 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
CDX2-202ENST00000548877 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
CDX2-202ENST00000548877 TCAPO15273 167 aa8.77□□□□□ -1.01
CDX2-202ENST00000548877 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
CDX2-202ENST00000548877 F5H697 171 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 FCER1GP30273 86 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 ORMDL2Q53FV1 153 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 Q6ZRU5 148 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 SMIM2Q9BVW6 85 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 ST20Q9HBF5 79 aa8.76□□□□□ -1.01
CDX2-202ENST00000548877 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
CDX2-202ENST00000548877 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
CDX2-202ENST00000548877 ZNF56Q15929 161 aa8.75□□□□□ -1.01
CDX2-202ENST00000548877 IGHV3-73A0A0B4J1V6 119 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 TRAV26-2A0A0B4J265 109 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 PKIAP61925 76 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 C14orf177Q52M58 125 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 SUMO4Q6EEV6 95 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 ZFP2Q6ZN57 461 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 DNAJC30Q96LL9 226 aa8.74□□□□□ -1.01
CDX2-202ENST00000548877 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 A0A087WWL8 130 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 VCYO14598 125 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 ATP5LO75964 103 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 FAM74A4Q5TZK3 123 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 CHCHD7Q9BUK0 85 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 VAMP8Q9BV40 100 aa8.73□□□□□ -1.01
CDX2-202ENST00000548877 KIR2DL4Q99706 377 aa8.72□□□□□ -1.01
CDX2-202ENST00000548877 GAGE12JA6NER3 117 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 M0QY20 66 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 GAGE1Q13065 139 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 GAGE4Q13068 117 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 GAGE5Q13069 117 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 IFI27L1Q96BM0 104 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 RPL39LQ96EH5 51 aaKnown RBP8.71□□□□□ -1.02
CDX2-202ENST00000548877 JPT2Q9H910 190 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 Q9UF83 564 aa8.71□□□□□ -1.02
CDX2-202ENST00000548877 A0A096LNJ9 63 aa8.7□□□□□ -1.02
CDX2-202ENST00000548877 PCP4L1A6NKN8 68 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms