RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 FGF6P10767 208 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 OSTCQ9NRP0 149 aa7.45□□□□□ -1.22
TRAFD1-205ENST00000548277 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
TRAFD1-205ENST00000548277 KRTAP10-8P60410 259 aa7.44□□□□□ -1.22
TRAFD1-205ENST00000548277 REG3GQ6UW15 175 aa7.44□□□□□ -1.22
TRAFD1-205ENST00000548277 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
TRAFD1-205ENST00000548277 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
TRAFD1-205ENST00000548277 A0A1B0GVG6 124 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 RAB4AP20338 218 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 XCL1P47992 114 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 FOXI1Q12951 378 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 SPINK6Q6UWN8 80 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
TRAFD1-205ENST00000548277 GVQW2A0A096LPI5 108 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 TSHBP01222 138 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 ESDP10768 282 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 TMEM101Q96IK0 257 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 BTF3L4Q96K17 158 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 V9GYV3 84 aa7.42□□□□□ -1.22
TRAFD1-205ENST00000548277 SMKR1H3BMG3 65 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 CCL25O15444 150 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 ZNF25P17030 456 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 GAGE2BQ13066 116 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 RIGQ13278 110 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 TMEM241Q24JQ0 296 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 OR5A1Q8NGJ0 315 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
TRAFD1-205ENST00000548277 TRBV27A0A0K0K1C4 114 aa7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 RPL23P62829 140 aaKnown RBP7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 Q6ZRP5 223 aa7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 CARD19Q96LW7 228 aa7.4□□□□□ -1.22
TRAFD1-205ENST00000548277 C9JQL5 133 aa7.39□□□□□ -1.23
TRAFD1-205ENST00000548277 ADIRFQ15847 76 aa7.39□□□□□ -1.23
TRAFD1-205ENST00000548277 FAM74A3Q4VXF1 159 aa7.39□□□□□ -1.23
TRAFD1-205ENST00000548277 LINC00474Q9P2X8 69 aa7.39□□□□□ -1.23
TRAFD1-205ENST00000548277 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 ZNF561-AS1K7EIQ3 104 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 VCYO14598 125 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 SS18Q15532 418 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 CDC42SE2Q9NRR3 84 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 NAT8Q9UHE5 227 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 NAT8BQ9UHF3 227 aa7.38□□□□□ -1.23
TRAFD1-205ENST00000548277 LPAP08519 4548 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 A0A1W2PNN7 141 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 FCER1GP30273 86 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 SRSF3P84103 164 aaKnown RBP7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 MRPL52Q86TS9 123 aaKnown RBP7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 ZNF664Q8N3J9 261 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 NRACQ8N912 160 aa7.37□□□□□ -1.23
TRAFD1-205ENST00000548277 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 PPP1R17O96001 155 aa7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 CAMPP49913 170 aa7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 SUMO2P61956 95 aaKnown RBP7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 PEA15Q15121 130 aa7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 FAM104BQ5XKR9 115 aa7.36□□□□□ -1.23
TRAFD1-205ENST00000548277 IGLV4-69A0A075B6H9 119 aa7.35□□□□□ -1.23
TRAFD1-205ENST00000548277 PTTG1IPP53801 180 aa7.35□□□□□ -1.23
TRAFD1-205ENST00000548277 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
TRAFD1-205ENST00000548277 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
TRAFD1-205ENST00000548277 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 PPP1R2P9O14990 202 aa7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 MT-ND6P03923 174 aa7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 MALP21145 153 aa7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 RNASE13Q5GAN3 156 aaKnown RBP7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 PHF5AQ7RTV0 110 aaKnown RBP7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 PKIGQ9Y2B9 76 aa7.34□□□□□ -1.23
TRAFD1-205ENST00000548277 LINC00862A6NCI5 91 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 C1orf196B1AJZ1 125 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 CKS2P33552 79 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 SMAGPQ0VAQ4 97 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 C9orf116Q5BN46 136 aaPredicted RBP7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 OPRPNQ99935 248 aaPredicted RBP7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 SMDT1Q9H4I9 107 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 PSORS1C2Q9UIG4 136 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 CSDC2Q9Y534 153 aaKnown RBP7.33□□□□□ -1.24
TRAFD1-205ENST00000548277 TRAV13-1A0A0B4J241 112 aa7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 A0A1B0GW15 77 aa7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 RPL18AQ02543 176 aaKnown RBP7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 MRPL54Q6P161 138 aaKnown RBP7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 CAMK2N2Q96S95 79 aa7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
TRAFD1-205ENST00000548277 TRBV24-1A0A075B6N3 115 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 COX7A2LO14548 114 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 C5orf38Q86SI9 138 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 PRR26Q8N8Z3 221 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 TMEM18Q96B42 140 aa7.31□□□□□ -1.24
TRAFD1-205ENST00000548277 D6R8Y8 96 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 818.7 ms