RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 XCL1P47992 114 aa12.67□□□□□ -0.38
CHD4-213ENST00000545584 SS18Q15532 418 aa12.67□□□□□ -0.38
CHD4-213ENST00000545584 GVQW2A0A096LPI5 108 aaPredicted RBP12.66□□□□□ -0.38
CHD4-213ENST00000545584 LINC00959A0A1B0GUT2 108 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 VCYO14598 125 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 FCER1GP30273 86 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 RPL23P62829 140 aaKnown RBP12.66□□□□□ -0.38
CHD4-213ENST00000545584 FOXI1Q12951 378 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 ADIRFQ15847 76 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 SPACA4Q8TDM5 124 aa12.66□□□□□ -0.38
CHD4-213ENST00000545584 CCL25O15444 150 aa12.65□□□□□ -0.38
CHD4-213ENST00000545584 COX6A2Q02221 97 aa12.65□□□□□ -0.38
CHD4-213ENST00000545584 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.38
CHD4-213ENST00000545584 MRPL52Q86TS9 123 aaKnown RBP12.65□□□□□ -0.38
CHD4-213ENST00000545584 NAT8Q9UHE5 227 aa12.65□□□□□ -0.38
CHD4-213ENST00000545584 SMKR1H3BMG3 65 aa12.64□□□□□ -0.39
CHD4-213ENST00000545584 PEA15Q15121 130 aa12.64□□□□□ -0.39
CHD4-213ENST00000545584 CDC42SE2Q9NRR3 84 aa12.64□□□□□ -0.39
CHD4-213ENST00000545584 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
CHD4-213ENST00000545584 C9JQL5 133 aa12.63□□□□□ -0.39
CHD4-213ENST00000545584 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
CHD4-213ENST00000545584 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
CHD4-213ENST00000545584 KIR2DL4Q99706 377 aa12.63□□□□□ -0.39
CHD4-213ENST00000545584 PPP1R2P9O14990 202 aa12.62□□□□□ -0.39
CHD4-213ENST00000545584 HNRNPA3P51991 378 aaKnown RBP12.62□□□□□ -0.39
CHD4-213ENST00000545584 SRSF3P84103 164 aaKnown RBP12.62□□□□□ -0.39
CHD4-213ENST00000545584 SERTAD4-AS1Q5TG53 156 aa12.62□□□□□ -0.39
CHD4-213ENST00000545584 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
CHD4-213ENST00000545584 PKIGQ9Y2B9 76 aa12.62□□□□□ -0.39
CHD4-213ENST00000545584 IGKV2-24A0A0C4DH68 120 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 MAJINQ3KP22 176 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 CD164L2Q6UWJ8 174 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 NRACQ8N912 160 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 PRSS3P2Q8NHM4 247 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 SMDT1Q9H4I9 107 aa12.61□□□□□ -0.39
CHD4-213ENST00000545584 A0A1B0GW15 77 aa12.6□□□□□ -0.39
CHD4-213ENST00000545584 SMIM27A0A1W2PRY6 76 aa12.6□□□□□ -0.39
CHD4-213ENST00000545584 CAMPP49913 170 aa12.6□□□□□ -0.39
CHD4-213ENST00000545584 FAM104BQ5XKR9 115 aa12.6□□□□□ -0.39
CHD4-213ENST00000545584 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
CHD4-213ENST00000545584 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
CHD4-213ENST00000545584 TMEM18Q96B42 140 aa12.59□□□□□ -0.39
CHD4-213ENST00000545584 CSDC2Q9Y534 153 aaKnown RBP12.59□□□□□ -0.39
CHD4-213ENST00000545584 LINC00862A6NCI5 91 aa12.58□□□□□ -0.4
CHD4-213ENST00000545584 Q6ZRU5 148 aa12.58□□□□□ -0.4
CHD4-213ENST00000545584 LINC00474Q9P2X8 69 aa12.58□□□□□ -0.4
CHD4-213ENST00000545584 C1orf196B1AJZ1 125 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 S100A8P05109 93 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 CKS2P33552 79 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 STPG4Q8N801 248 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 C20orf78Q9BR46 151 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 UBE2D4Q9Y2X8 147 aa12.57□□□□□ -0.4
CHD4-213ENST00000545584 MALP21145 153 aa12.56□□□□□ -0.4
CHD4-213ENST00000545584 LINC00526Q96FQ7 95 aa12.56□□□□□ -0.4
CHD4-213ENST00000545584 F8W036 122 aa12.55□□□□□ -0.4
CHD4-213ENST00000545584 PHOX2AO14813 284 aa12.55□□□□□ -0.4
CHD4-213ENST00000545584 TCAPO15273 167 aa12.55□□□□□ -0.4
CHD4-213ENST00000545584 LRP1Q07954 4544 aaKnown RBP12.55□□□□□ -0.4
CHD4-213ENST00000545584 TRBV24-1A0A075B6N3 115 aa12.54□□□□□ -0.4
CHD4-213ENST00000545584 A0A096LNI7 61 aa12.54□□□□□ -0.4
CHD4-213ENST00000545584 COX7A2LO14548 114 aa12.54□□□□□ -0.4
CHD4-213ENST00000545584 SYCNQ0VAF6 134 aa12.54□□□□□ -0.4
CHD4-213ENST00000545584 TRAV13-1A0A0B4J241 112 aa12.53□□□□□ -0.4
CHD4-213ENST00000545584 RPL32P62910 135 aaKnown RBP12.53□□□□□ -0.4
CHD4-213ENST00000545584 HBBP68871 147 aa12.53□□□□□ -0.4
CHD4-213ENST00000545584 RNASE13Q5GAN3 156 aaKnown RBP12.53□□□□□ -0.4
CHD4-213ENST00000545584 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
CHD4-213ENST00000545584 TIMM21Q9BVV7 248 aa12.53□□□□□ -0.4
CHD4-213ENST00000545584 TNFRSF6BO95407 300 aa12.52□□□□□ -0.41
CHD4-213ENST00000545584 Q6ZUT4 128 aa12.51□□□□□ -0.41
CHD4-213ENST00000545584 D6R8Y8 96 aa12.5□□□□□ -0.41
CHD4-213ENST00000545584 APOMO95445 188 aa12.5□□□□□ -0.41
CHD4-213ENST00000545584 SMIM2Q9BVW6 85 aa12.5□□□□□ -0.41
CHD4-213ENST00000545584 IGLV4-69A0A075B6H9 119 aa12.49□□□□□ -0.41
CHD4-213ENST00000545584 PPBPP02775 128 aa12.49□□□□□ -0.41
CHD4-213ENST00000545584 A0A1B0GXF2 115 aa12.48□□□□□ -0.41
CHD4-213ENST00000545584 C5orf38Q86SI9 138 aa12.48□□□□□ -0.41
CHD4-213ENST00000545584 CAMK2N2Q96S95 79 aa12.48□□□□□ -0.41
CHD4-213ENST00000545584 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
CHD4-213ENST00000545584 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
CHD4-213ENST00000545584 RPL39P62891 51 aaKnown RBP12.47□□□□□ -0.41
CHD4-213ENST00000545584 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
CHD4-213ENST00000545584 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
CHD4-213ENST00000545584 PLA2G2DQ9UNK4 145 aa12.47□□□□□ -0.41
CHD4-213ENST00000545584 PKHD1L1Q86WI1 4243 aa12.47□□□□□ -0.41
CHD4-213ENST00000545584 NPYP01303 97 aa12.46□□□□□ -0.41
CHD4-213ENST00000545584 GAGE2BQ13066 116 aa12.46□□□□□ -0.41
CHD4-213ENST00000545584 ATP5L2Q7Z4Y8 100 aa12.46□□□□□ -0.41
CHD4-213ENST00000545584 C2orf48Q96LS8 159 aa12.46□□□□□ -0.41
CHD4-213ENST00000545584 PTTG1IPP53801 180 aa12.45□□□□□ -0.42
CHD4-213ENST00000545584 ORMDL3Q8N138 153 aa12.45□□□□□ -0.42
CHD4-213ENST00000545584 RAB5AP20339 215 aa12.44□□□□□ -0.42
CHD4-213ENST00000545584 MT1HL1P0DM35 61 aa12.43□□□□□ -0.42
CHD4-213ENST00000545584 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
CHD4-213ENST00000545584 SPAG11BQ08648 103 aa12.43□□□□□ -0.42
CHD4-213ENST00000545584 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
CHD4-213ENST00000545584 RAB14P61106 215 aa12.42□□□□□ -0.42
CHD4-213ENST00000545584 PRELID3AQ96N28 172 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms