RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RBMY1DP0C7P1 496 aaKnown RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
CDH4-201ENST00000543233 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 PRIMA1Q86XR5 153 aa8.37□□□□□ -1.07
CDH4-201ENST00000543233 FAM110DQ8TAY7 271 aaPredicted RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 NXPH4O95158 308 aa8.37□□□□□ -1.07
CDH4-201ENST00000543233 GHRHP01286 108 aa8.37□□□□□ -1.07
CDH4-201ENST00000543233 DAND5Q8N907 189 aa8.37□□□□□ -1.07
CDH4-201ENST00000543233 OPRPNQ99935 248 aaPredicted RBP8.37□□□□□ -1.07
CDH4-201ENST00000543233 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 H3BUX3 64 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 TSHBP01222 138 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 BLCAPP62952 87 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 C11orf21Q9P2W6 132 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 SERP1Q9Y6X1 66 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 MTORP42345 2549 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 NDUFC2O95298 119 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 PDE6HQ13956 83 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 ACANP16112 2415 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 TEX15Q9BXT5 2789 aa8.36□□□□□ -1.07
CDH4-201ENST00000543233 GCN1Q92616 2671 aaKnown RBP8.35□□□□□ -1.07
CDH4-201ENST00000543233 BUB3O43684 328 aa8.35□□□□□ -1.07
CDH4-201ENST00000543233 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
CDH4-201ENST00000543233 RBM3P98179 157 aaKnown RBP8.35□□□□□ -1.07
CDH4-201ENST00000543233 SS18Q15532 418 aa8.35□□□□□ -1.07
CDH4-201ENST00000543233 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
CDH4-201ENST00000543233 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
CDH4-201ENST00000543233 C20orf173Q96LM9 149 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 IGHV1-69DA0A0B4J2H0 117 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 IGHV1-69P01742 117 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 UNQ9165/PRO28630Q6UXU0 137 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 LINC00474Q9P2X8 69 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 C2CD3Q4AC94 2353 aa8.34□□□□□ -1.07
CDH4-201ENST00000543233 CLPSL1A2RUU4 121 aa8.34□□□□□ -1.08
CDH4-201ENST00000543233 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.08
CDH4-201ENST00000543233 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.08
CDH4-201ENST00000543233 KMT2BQ9UMN6 2715 aaPredicted RBP8.33□□□□□ -1.08
CDH4-201ENST00000543233 FBN2P35556 2912 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 SMIM26A0A096LP01 95 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 IGHV7-4-1A0A0J9YVY3 117 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 F5H697 171 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 IGHG2P01859 326 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 HILS1P60008 231 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 MOB4Q9Y3A3 225 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 PHLDA3Q9Y5J5 127 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 ADAMTSL4-AS1Q5T5F5 129 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 WFDC9Q8NEX5 89 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 Q9HAA7 133 aa8.33□□□□□ -1.08
CDH4-201ENST00000543233 IGF1P05019 195 aa8.32□□□□□ -1.08
CDH4-201ENST00000543233 HOXD3P31249 432 aaPredicted RBP8.32□□□□□ -1.08
CDH4-201ENST00000543233 C14orf132Q9NPU4 83 aa8.32□□□□□ -1.08
CDH4-201ENST00000543233 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
CDH4-201ENST00000543233 F6UB75 175 aa8.32□□□□□ -1.08
CDH4-201ENST00000543233 TMEM61Q8N0U2 210 aa8.32□□□□□ -1.08
CDH4-201ENST00000543233 ZNF876PQ49A33 203 aa8.31□□□□□ -1.08
CDH4-201ENST00000543233 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
CDH4-201ENST00000543233 NF1P21359 2839 aa8.31□□□□□ -1.08
CDH4-201ENST00000543233 NDUFC2-KCTD14E9PQ53 114 aa8.31□□□□□ -1.08
CDH4-201ENST00000543233 NBPF19A0A087WUL8 3843 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 TIMM17BO60830 172 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 XCL1P47992 114 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 C10orf99Q6UWK7 81 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 ZNF843Q8N446 348 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 ZNF625Q96I27 306 aaPredicted RBP8.3□□□□□ -1.08
CDH4-201ENST00000543233 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 XCL2Q9UBD3 114 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 NDUFA12Q9UI09 145 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 PSMB8P28062 276 aa8.3□□□□□ -1.08
CDH4-201ENST00000543233 COX8CQ7Z4L0 72 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 A8MZ25 164 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 COX7A2LO14548 114 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 LINC00846Q9NV44 126 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 MSMBP08118 114 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 MIAQ16674 131 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 Q6JHZ5 121 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 SNURFQ9Y675 71 aa8.29□□□□□ -1.08
CDH4-201ENST00000543233 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
CDH4-201ENST00000543233 IGKV3-20P01619 116 aa8.27□□□□□ -1.08
CDH4-201ENST00000543233 PMAIP1Q13794 54 aa8.27□□□□□ -1.08
CDH4-201ENST00000543233 SOSTDC1Q6X4U4 206 aa8.27□□□□□ -1.08
CDH4-201ENST00000543233 JMJD1CQ15652 2540 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 C6orf226Q5I0X4 101 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 PRR9Q5T870 116 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 HIST2H2BCQ6DN03 193 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 TIMM17AQ99595 171 aa8.27□□□□□ -1.09
CDH4-201ENST00000543233 FAM74A4Q5TZK3 123 aa8.26□□□□□ -1.09
CDH4-201ENST00000543233 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
CDH4-201ENST00000543233 LITAFQ99732 161 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms