RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 V9GYV3 84 aa9.92□□□□□ -0.82
VPS33A-206ENST00000542310 LINC00959A0A1B0GUT2 108 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 C7orf77A4D0Y5 90 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 RIGQ13278 110 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 Q6ZRU5 148 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
VPS33A-206ENST00000542310 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
VPS33A-206ENST00000542310 COX6A2Q02221 97 aa9.9□□□□□ -0.82
VPS33A-206ENST00000542310 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
VPS33A-206ENST00000542310 NUP35Q8NFH5 326 aa9.9□□□□□ -0.82
VPS33A-206ENST00000542310 HMCN2Q8NDA2 5059 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 CCL25O15444 150 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 XCL1P47992 114 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 C7orf33Q8WU49 177 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 CDC42SE2Q9NRR3 84 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
VPS33A-206ENST00000542310 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
VPS33A-206ENST00000542310 SS18Q15532 418 aa9.88□□□□□ -0.83
VPS33A-206ENST00000542310 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
VPS33A-206ENST00000542310 CD164L2Q6UWJ8 174 aa9.88□□□□□ -0.83
VPS33A-206ENST00000542310 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
VPS33A-206ENST00000542310 CSDC2Q9Y534 153 aaKnown RBP9.88□□□□□ -0.83
VPS33A-206ENST00000542310 VCYO14598 125 aa9.87□□□□□ -0.83
VPS33A-206ENST00000542310 SUMO2P61956 95 aaKnown RBP9.87□□□□□ -0.83
VPS33A-206ENST00000542310 RPL23P62829 140 aaKnown RBP9.87□□□□□ -0.83
VPS33A-206ENST00000542310 ZNF664Q8N3J9 261 aa9.87□□□□□ -0.83
VPS33A-206ENST00000542310 NRACQ8N912 160 aa9.87□□□□□ -0.83
VPS33A-206ENST00000542310 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
VPS33A-206ENST00000542310 PHOX2AO14813 284 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 FCER1GP30273 86 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 MAJINQ3KP22 176 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 CARD19Q96LW7 228 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
VPS33A-206ENST00000542310 IGKV2-24A0A0C4DH68 120 aa9.85□□□□□ -0.83
VPS33A-206ENST00000542310 A0A1B0GW15 77 aa9.85□□□□□ -0.83
VPS33A-206ENST00000542310 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
VPS33A-206ENST00000542310 ADIRFQ15847 76 aa9.85□□□□□ -0.83
VPS33A-206ENST00000542310 SMDT1Q9H4I9 107 aa9.85□□□□□ -0.83
VPS33A-206ENST00000542310 A0A096LNI7 61 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 SMKR1H3BMG3 65 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 TCAPO15273 167 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
VPS33A-206ENST00000542310 FAM104BQ5XKR9 115 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 STPG4Q8N801 248 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
VPS33A-206ENST00000542310 C1orf196B1AJZ1 125 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 ZNF561-AS1K7EIQ3 104 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 MRPL51Q4U2R6 128 aaKnown RBP9.83□□□□□ -0.84
VPS33A-206ENST00000542310 TMEM18Q96B42 140 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 C20orf78Q9BR46 151 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 TIMM21Q9BVV7 248 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 PLA2G2DQ9UNK4 145 aa9.83□□□□□ -0.84
VPS33A-206ENST00000542310 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
VPS33A-206ENST00000542310 CAMPP49913 170 aa9.82□□□□□ -0.84
VPS33A-206ENST00000542310 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
VPS33A-206ENST00000542310 PEA15Q15121 130 aa9.82□□□□□ -0.84
VPS33A-206ENST00000542310 C9JQL5 133 aa9.81□□□□□ -0.84
VPS33A-206ENST00000542310 COX7A2LO14548 114 aa9.81□□□□□ -0.84
VPS33A-206ENST00000542310 S100A8P05109 93 aa9.81□□□□□ -0.84
VPS33A-206ENST00000542310 SYCNQ0VAF6 134 aa9.81□□□□□ -0.84
VPS33A-206ENST00000542310 MALP21145 153 aa9.8□□□□□ -0.84
VPS33A-206ENST00000542310 A0A1B0GVG6 124 aa9.79□□□□□ -0.84
VPS33A-206ENST00000542310 F8W036 122 aa9.79□□□□□ -0.84
VPS33A-206ENST00000542310 HBBP68871 147 aa9.79□□□□□ -0.84
VPS33A-206ENST00000542310 Q6ZUT4 128 aa9.79□□□□□ -0.84
VPS33A-206ENST00000542310 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
VPS33A-206ENST00000542310 TNXBP22105 4242 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 A0A1B0GXF2 115 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 CKS2P33552 79 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 PTTG1IPP53801 180 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
VPS33A-206ENST00000542310 TRAV13-1A0A0B4J241 112 aa9.77□□□□□ -0.85
VPS33A-206ENST00000542310 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
VPS33A-206ENST00000542310 APOMO95445 188 aa9.77□□□□□ -0.85
VPS33A-206ENST00000542310 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
VPS33A-206ENST00000542310 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.85
VPS33A-206ENST00000542310 PPBPP02775 128 aa9.76□□□□□ -0.85
VPS33A-206ENST00000542310 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
VPS33A-206ENST00000542310 D6R8Y8 96 aa9.75□□□□□ -0.85
VPS33A-206ENST00000542310 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
VPS33A-206ENST00000542310 MRPL54Q6P161 138 aaKnown RBP9.75□□□□□ -0.85
VPS33A-206ENST00000542310 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
VPS33A-206ENST00000542310 OR10D4PQ8NGN7 298 aa9.75□□□□□ -0.85
VPS33A-206ENST00000542310 CAMK2N2Q96S95 79 aa9.75□□□□□ -0.85
VPS33A-206ENST00000542310 F8WDY8 70 aa9.74□□□□□ -0.85
VPS33A-206ENST00000542310 NPYP01303 97 aa9.73□□□□□ -0.85
VPS33A-206ENST00000542310 RPL39P62891 51 aaKnown RBP9.73□□□□□ -0.85
VPS33A-206ENST00000542310 SPAG11BQ08648 103 aa9.73□□□□□ -0.85
VPS33A-206ENST00000542310 RNF151Q2KHN1 245 aa9.73□□□□□ -0.85
VPS33A-206ENST00000542310 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
VPS33A-206ENST00000542310 Q6ZRP5 223 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms