RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	RPL39L	Q96EH5	51 aa	Known RBP	6.12	□□□□□ -1.43
PPFIA1-223	ENST00000532793		A8MWL6	223 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	PHOX2A	O14813	284 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SLPI	P03973	132 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CEBPG	P53567	150 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SS18	Q15532	418 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	OR5A1	Q8NGJ0	315 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	OCC1	Q8TAD7	63 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	MRAP2	Q96G30	205 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	PLAC8	Q9NZF1	115 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	LINC00474	Q9P2X8	69 aa		6.11	□□□□□ -1.43
PPFIA1-223	ENST00000532793	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793		A0A1B0GVG6	124 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793		K7EN84	100 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793	XCL1	P47992	114 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793	STPG4	Q8N801	248 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793	PRSS3P2	Q8NHM4	247 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793	ST20	Q9HBF5	79 aa		6.1	□□□□□ -1.43
PPFIA1-223	ENST00000532793	hCG_2014768	A0A024R1R8	64 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	IGHV1-58	A0A0C4DH39	117 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	TMEM250	H0YL14	139 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	ZNF561-AS1	K7EIQ3	104 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	CCL25	O15444	150 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	BLOC1S1	P78537	153 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	SMAGP	Q0VAQ4	97 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	LYPD6B	Q8NI32	183 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	FAM210A	Q96ND0	272 aa		6.09	□□□□□ -1.43
PPFIA1-223	ENST00000532793	FOXI1	Q12951	378 aa		6.08	□□□□□ -1.44
PPFIA1-223	ENST00000532793	FAM231D	Q6ZW35	169 aa		6.08	□□□□□ -1.44
PPFIA1-223	ENST00000532793	ISOC2	Q96AB3	205 aa		6.08	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CARD19	Q96LW7	228 aa		6.08	□□□□□ -1.44
PPFIA1-223	ENST00000532793		A0A096LNI7	61 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	LINC00959	A0A1B0GUT2	108 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	C7orf77	A4D0Y5	90 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	MAL	P21145	153 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	FCER1G	P30273	86 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	FOXA3	P55318	350 aa	Predicted RBP	6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	PRR3	P79522	188 aa	Known RBP	6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CT83	Q5H943	113 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	REG3G	Q6UW15	175 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	EIF5A2	Q9GZV4	153 aa	Known RBP	6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TMEM242	Q9NWH2	141 aa		6.07	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TRBV6-5	A0A0K0K1A5	114 aa		6.06	□□□□□ -1.44
PPFIA1-223	ENST00000532793		A0A1B0GUT8	65 aa		6.06	□□□□□ -1.44
PPFIA1-223	ENST00000532793	PPP1R17	O96001	155 aa		6.06	□□□□□ -1.44
PPFIA1-223	ENST00000532793	MT1HL1	P0DM35	61 aa		6.06	□□□□□ -1.44
PPFIA1-223	ENST00000532793	SMIM7	Q9BQ49	75 aa		6.06	□□□□□ -1.44
PPFIA1-223	ENST00000532793	HIGD1C	A8MV81	97 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	SYCN	Q0VAF6	134 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CD164L2	Q6UWJ8	174 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	ALKAL2	Q6UX46	152 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	AKAP14	Q86UN6	197 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	ZNF664	Q8N3J9	261 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TSKU	Q8WUA8	353 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TMEM18	Q96B42	140 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	KIR2DL4	Q99706	377 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TMEM191A	Q9H0A3	160 aa		6.05	□□□□□ -1.44
PPFIA1-223	ENST00000532793	FAM231B	A6NCW3	169 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	ZNF727	A8MUV8	499 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	C1orf196	B1AJZ1	125 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TSHB	P01222	138 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	ESD	P10768	282 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CAMP	P49913	170 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	GAGE2B	Q13066	116 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	RIG	Q13278	110 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	SPINK6	Q6UWN8	80 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793		Q6ZRP5	223 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	MRPL52	Q86TS9	123 aa	Known RBP	6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	LINC00526	Q96FQ7	95 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	LINC01600	Q96MT4	127 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CDC42SE2	Q9NRR3	84 aa		6.04	□□□□□ -1.44
PPFIA1-223	ENST00000532793	TRBV27	A0A0K0K1C4	114 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	LOC107984640	A0A0U1RRK4	108 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	COX7A2L	O14548	114 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	VCY	O14598	125 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	APOM	O95445	188 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	RAB4A	P20338	218 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	LINC01551	Q86U37	167 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	AMN1	Q8IY45	258 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	CAMK2N2	Q96S95	79 aa		6.03	□□□□□ -1.44
PPFIA1-223	ENST00000532793	IGLV4-69	A0A075B6H9	119 aa		6.02	□□□□□ -1.45
PPFIA1-223	ENST00000532793	PPP1R2P9	O14990	202 aa		6.02	□□□□□ -1.45
PPFIA1-223	ENST00000532793	POLR2K	P53803	58 aa	Known RBP	6.02	□□□□□ -1.45
PPFIA1-223	ENST00000532793	SUMO2	P61956	95 aa	Known RBP	6.02	□□□□□ -1.45
PPFIA1-223	ENST00000532793	OSTC	Q9NRP0	149 aa		6.02	□□□□□ -1.45
PPFIA1-223	ENST00000532793	TRAV13-1	A0A0B4J241	112 aa		6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793		A0A0J9YXV3	536 aa		6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	GAS8-AS1	O95177	125 aa		6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	PTTG1IP	P53801	180 aa		6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	RPL18A	Q02543	176 aa	Known RBP	6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	NAT8B	Q9UHF3	227 aa		6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	CSDC2	Q9Y534	153 aa	Known RBP	6.01	□□□□□ -1.45
PPFIA1-223	ENST00000532793	SMKR1	H3BMG3	65 aa		6	□□□□□ -1.45
PPFIA1-223	ENST00000532793	TCAP	O15273	167 aa		6	□□□□□ -1.45
PPFIA1-223	ENST00000532793	RNASE13	Q5GAN3	156 aa	Known RBP	6	□□□□□ -1.45
PPFIA1-223	ENST00000532793	UBE2D4	Q9Y2X8	147 aa		6	□□□□□ -1.45
PPFIA1-223	ENST00000532793	LRP1	Q07954	4544 aa	Known RBP	5.99	□□□□□ -1.45
PPFIA1-223	ENST00000532793		H3BS24	57 aa		5.99	□□□□□ -1.45
PPFIA1-223	ENST00000532793	MT-ND6	P03923	174 aa		5.99	□□□□□ -1.45
PPFIA1-223	ENST00000532793	SPAG11B	Q08648	103 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms