RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.58
SSSCA1-206ENST00000531405 hCG_2014768A0A024R1R8 64 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 SS18Q15532 418 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 Q6ZRP5 223 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 MRAP2Q96G30 205 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 CDC42SE2Q9NRR3 84 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
SSSCA1-206ENST00000531405 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
SSSCA1-206ENST00000531405 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
SSSCA1-206ENST00000531405 A8MWL6 223 aa11.38□□□□□ -0.59
SSSCA1-206ENST00000531405 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
SSSCA1-206ENST00000531405 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
SSSCA1-206ENST00000531405 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
SSSCA1-206ENST00000531405 SLC51BQ86UW2 128 aa11.38□□□□□ -0.59
SSSCA1-206ENST00000531405 CAMPP49913 170 aa11.37□□□□□ -0.59
SSSCA1-206ENST00000531405 MRPL52Q86TS9 123 aaKnown RBP11.37□□□□□ -0.59
SSSCA1-206ENST00000531405 ZNF664Q8N3J9 261 aa11.37□□□□□ -0.59
SSSCA1-206ENST00000531405 LPAP08519 4548 aa11.37□□□□□ -0.59
SSSCA1-206ENST00000531405 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
SSSCA1-206ENST00000531405 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
SSSCA1-206ENST00000531405 FAM231DQ6ZW35 169 aa11.36□□□□□ -0.59
SSSCA1-206ENST00000531405 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
SSSCA1-206ENST00000531405 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
SSSCA1-206ENST00000531405 C7orf77A4D0Y5 90 aa11.35□□□□□ -0.59
SSSCA1-206ENST00000531405 CEBPGP53567 150 aa11.35□□□□□ -0.59
SSSCA1-206ENST00000531405 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
SSSCA1-206ENST00000531405 TRBV27A0A0K0K1C4 114 aa11.34□□□□□ -0.59
SSSCA1-206ENST00000531405 RNASE13Q5GAN3 156 aaKnown RBP11.34□□□□□ -0.59
SSSCA1-206ENST00000531405 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 SMKR1H3BMG3 65 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 RAB4AP20338 218 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 MALP21145 153 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 CT83Q5H943 113 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 AKAP14Q86UN6 197 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 AMN1Q8IY45 258 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 TCTE3Q8IZS6 198 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 NUP35Q8NFH5 326 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 ISOC2Q96AB3 205 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 TMEM191AQ9H0A3 160 aa11.33□□□□□ -0.6
SSSCA1-206ENST00000531405 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
SSSCA1-206ENST00000531405 COX7A2LO14548 114 aa11.32□□□□□ -0.6
SSSCA1-206ENST00000531405 CAMK2N2Q96S95 79 aa11.32□□□□□ -0.6
SSSCA1-206ENST00000531405 PSORS1C2Q9UIG4 136 aa11.31□□□□□ -0.6
SSSCA1-206ENST00000531405 C1orf196B1AJZ1 125 aa11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 FCER1GP30273 86 aa11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 UBE2D4Q9Y2X8 147 aa11.3□□□□□ -0.6
SSSCA1-206ENST00000531405 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
SSSCA1-206ENST00000531405 APOMO95445 188 aa11.29□□□□□ -0.6
SSSCA1-206ENST00000531405 RPL18AQ02543 176 aaKnown RBP11.29□□□□□ -0.6
SSSCA1-206ENST00000531405 ALKAL2Q6UX46 152 aa11.29□□□□□ -0.6
SSSCA1-206ENST00000531405 C5orf38Q86SI9 138 aa11.29□□□□□ -0.6
SSSCA1-206ENST00000531405 VCYO14598 125 aa11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 MT-ND6P03923 174 aa11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
SSSCA1-206ENST00000531405 Q6ZUT4 128 aa11.27□□□□□ -0.61
SSSCA1-206ENST00000531405 NRACQ8N912 160 aa11.27□□□□□ -0.61
SSSCA1-206ENST00000531405 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
SSSCA1-206ENST00000531405 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
SSSCA1-206ENST00000531405 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
SSSCA1-206ENST00000531405 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
SSSCA1-206ENST00000531405 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
SSSCA1-206ENST00000531405 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
SSSCA1-206ENST00000531405 KIR2DL4Q99706 377 aa11.24□□□□□ -0.61
SSSCA1-206ENST00000531405 OSTCQ9NRP0 149 aa11.24□□□□□ -0.61
SSSCA1-206ENST00000531405 ZNF727A8MUV8 499 aa11.23□□□□□ -0.61
SSSCA1-206ENST00000531405 RIGQ13278 110 aa11.23□□□□□ -0.61
SSSCA1-206ENST00000531405 EIF5A2Q9GZV4 153 aaKnown RBP11.23□□□□□ -0.61
SSSCA1-206ENST00000531405 V9GYV3 84 aa11.23□□□□□ -0.61
SSSCA1-206ENST00000531405 SMAGPQ0VAQ4 97 aa11.22□□□□□ -0.61
SSSCA1-206ENST00000531405 PPP1R17O96001 155 aa11.21□□□□□ -0.61
SSSCA1-206ENST00000531405 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
SSSCA1-206ENST00000531405 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.61
SSSCA1-206ENST00000531405 PRR26Q8N8Z3 221 aa11.21□□□□□ -0.61
SSSCA1-206ENST00000531405 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
SSSCA1-206ENST00000531405 RNF151Q2KHN1 245 aa11.2□□□□□ -0.62
SSSCA1-206ENST00000531405 KRTAP11-1Q8IUC1 163 aa11.2□□□□□ -0.62
SSSCA1-206ENST00000531405 ORAOV1Q8WV07 137 aa11.2□□□□□ -0.62
SSSCA1-206ENST00000531405 TIMM21Q9BVV7 248 aa11.2□□□□□ -0.62
SSSCA1-206ENST00000531405 PPP1R2P9O14990 202 aa11.19□□□□□ -0.62
SSSCA1-206ENST00000531405 IGLV7-43P04211 117 aa11.19□□□□□ -0.62
SSSCA1-206ENST00000531405 SRP19P09132 144 aaKnown RBP11.19□□□□□ -0.62
SSSCA1-206ENST00000531405 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
SSSCA1-206ENST00000531405 FAM104AQ969W3 186 aa11.19□□□□□ -0.62
SSSCA1-206ENST00000531405 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
SSSCA1-206ENST00000531405 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
SSSCA1-206ENST00000531405 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
SSSCA1-206ENST00000531405 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
SSSCA1-206ENST00000531405 A0A087WZ39 114 aa11.17□□□□□ -0.62
SSSCA1-206ENST00000531405 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
SSSCA1-206ENST00000531405 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
SSSCA1-206ENST00000531405 IGHV3OR16-9A0A0B4J2B5 98 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms