RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 IGKV2-29A2NJV5 120 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 HBBP68871 147 aa14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 IFITM2Q01629 132 aa14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 FAM104BQ5XKR9 115 aa14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 MRPL54Q6P161 138 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 ANAPC16Q96DE5 110 aa14.23□□□□□ -0.13
TRAPPC4-210ENST00000531290 CIRBPQ14011 172 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-210ENST00000531290 LINC00862A6NCI5 91 aa14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 VCYO14598 125 aa14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 GAS8-AS1O95177 125 aa14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 FGF6P10767 208 aa14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 CKS2P33552 79 aa14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 CHCHD10Q8WYQ3 142 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-210ENST00000531290 SMKR1H3BMG3 65 aa14.2□□□□□ -0.14
TRAPPC4-210ENST00000531290 RPS10P46783 165 aaKnown RBP14.2□□□□□ -0.14
TRAPPC4-210ENST00000531290 C15orf56Q8N910 161 aa14.2□□□□□ -0.14
TRAPPC4-210ENST00000531290 BTF3L4Q96K17 158 aa14.2□□□□□ -0.14
TRAPPC4-210ENST00000531290 TRBV27A0A0K0K1C4 114 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 CHTF8P0CG12 524 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 FCER1GP30273 86 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 HNRNPA3P51991 378 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 POLR2KP53803 58 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 MRPL51Q4U2R6 128 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 HIGD2BQ4VC39 106 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 ATP5L2Q7Z4Y8 100 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 TMEM101Q96IK0 257 aa14.19□□□□□ -0.14
TRAPPC4-210ENST00000531290 PKHD1L1Q86WI1 4243 aa14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 A0A087WYN8 130 aa14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 ZNF25P17030 456 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 SUMO2P61956 95 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 KIR2DL4Q99706 377 aa14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 TMEM242Q9NWH2 141 aa14.18□□□□□ -0.14
TRAPPC4-210ENST00000531290 SPACA4Q8TDM5 124 aa14.17□□□□□ -0.14
TRAPPC4-210ENST00000531290 A0A1B0GXF2 115 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 TMEM218A2RU14 115 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 TSHBP01222 138 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 COX6A2Q02221 97 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 OR5A1Q8NGJ0 315 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 C20orf78Q9BR46 151 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 HMCN2Q8NDA2 5059 aa14.16□□□□□ -0.14
TRAPPC4-210ENST00000531290 PPBPP02775 128 aa14.15□□□□□ -0.14
TRAPPC4-210ENST00000531290 SMAGPQ0VAQ4 97 aa14.15□□□□□ -0.14
TRAPPC4-210ENST00000531290 NRACQ8N912 160 aa14.15□□□□□ -0.14
TRAPPC4-210ENST00000531290 GVQW2A0A096LPI5 108 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 C7orf77A4D0Y5 90 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 TCAPO15273 167 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 ESDP10768 282 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 XCL1P47992 114 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 FOXI1Q12951 378 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 COMMD7Q86VX2 200 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 PLAC8Q9NZF1 115 aa14.13□□□□□ -0.15
TRAPPC4-210ENST00000531290 TRBV24-1A0A075B6N3 115 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 D6R8Y8 96 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 TNFRSF6BO95407 300 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 Q6ZRU5 148 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 PRSS3P2Q8NHM4 247 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 C7orf33Q8WU49 177 aa14.12□□□□□ -0.15
TRAPPC4-210ENST00000531290 LINC00959A0A1B0GUT2 108 aa14.11□□□□□ -0.15
TRAPPC4-210ENST00000531290 MAJINQ3KP22 176 aa14.11□□□□□ -0.15
TRAPPC4-210ENST00000531290 TMEM18Q96B42 140 aa14.11□□□□□ -0.15
TRAPPC4-210ENST00000531290 SEC11CQ9BY50 192 aa14.11□□□□□ -0.15
TRAPPC4-210ENST00000531290 IGKV2-24A0A0C4DH68 120 aa14.1□□□□□ -0.15
TRAPPC4-210ENST00000531290 CCL25O15444 150 aa14.1□□□□□ -0.15
TRAPPC4-210ENST00000531290 SS18Q15532 418 aa14.1□□□□□ -0.15
TRAPPC4-210ENST00000531290 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
TRAPPC4-210ENST00000531290 CTDSP1Q9GZU7 261 aa14.1□□□□□ -0.15
TRAPPC4-210ENST00000531290 PHOX2AO14813 284 aa14.09□□□□□ -0.15
TRAPPC4-210ENST00000531290 TMEM136Q6ZRR5 245 aa14.09□□□□□ -0.15
TRAPPC4-210ENST00000531290 IMMP2LQ96T52 175 aa14.09□□□□□ -0.15
TRAPPC4-210ENST00000531290 IGHV1-58A0A0C4DH39 117 aa14.08□□□□□ -0.16
TRAPPC4-210ENST00000531290 RPL32P62910 135 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-210ENST00000531290 MRPL52Q86TS9 123 aaKnown RBP14.08□□□□□ -0.16
TRAPPC4-210ENST00000531290 CDC42SE2Q9NRR3 84 aa14.08□□□□□ -0.16
TRAPPC4-210ENST00000531290 PLA2G2DQ9UNK4 145 aa14.08□□□□□ -0.16
TRAPPC4-210ENST00000531290 ADCYAP1P18509 176 aa14.07□□□□□ -0.16
TRAPPC4-210ENST00000531290 ZNF664Q8N3J9 261 aa14.07□□□□□ -0.16
TRAPPC4-210ENST00000531290 PRELID3AQ96N28 172 aa14.07□□□□□ -0.16
TRAPPC4-210ENST00000531290 SMIM2Q9BVW6 85 aa14.07□□□□□ -0.16
TRAPPC4-210ENST00000531290 NPYP01303 97 aa14.06□□□□□ -0.16
TRAPPC4-210ENST00000531290 STPG4Q8N801 248 aa14.06□□□□□ -0.16
TRAPPC4-210ENST00000531290 PKIGQ9Y2B9 76 aa14.06□□□□□ -0.16
TRAPPC4-210ENST00000531290 RAB5AP20339 215 aa14.05□□□□□ -0.16
TRAPPC4-210ENST00000531290 S100PP25815 95 aa14.05□□□□□ -0.16
TRAPPC4-210ENST00000531290 CD164L2Q6UWJ8 174 aa14.05□□□□□ -0.16
TRAPPC4-210ENST00000531290 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
TRAPPC4-210ENST00000531290 ZNF561-AS1K7EIQ3 104 aa14.04□□□□□ -0.16
TRAPPC4-210ENST00000531290 LINC00526Q96FQ7 95 aa14.04□□□□□ -0.16
TRAPPC4-210ENST00000531290 LAMTOR2Q9Y2Q5 125 aa14.04□□□□□ -0.16
TRAPPC4-210ENST00000531290 CARD19Q96LW7 228 aa14.03□□□□□ -0.16
TRAPPC4-210ENST00000531290 CSDC2Q9Y534 153 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-210ENST00000531290 A0A096LNI7 61 aa14.02□□□□□ -0.17
TRAPPC4-210ENST00000531290 TRAV9-1A0A075B6T8 112 aa14.01□□□□□ -0.17
TRAPPC4-210ENST00000531290 MAP1LC3AQ9H492 121 aa14.01□□□□□ -0.17
TRAPPC4-210ENST00000531290 UBE2D4Q9Y2X8 147 aa14.01□□□□□ -0.17
TRAPPC4-210ENST00000531290 C1orf196B1AJZ1 125 aa14□□□□□ -0.17
TRAPPC4-210ENST00000531290 MT1HL1P0DM35 61 aa14□□□□□ -0.17
TRAPPC4-210ENST00000531290 MALP21145 153 aa14□□□□□ -0.17
TRAPPC4-210ENST00000531290 SYCNQ0VAF6 134 aa14□□□□□ -0.17
TRAPPC4-210ENST00000531290 TIMM21Q9BVV7 248 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms