RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 TSHBP01222 138 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 CAMPP49913 170 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 Q6ZRP5 223 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
CHMP4A-204ENST00000530996 LRP2P98164 4655 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 TRBV6-5A0A0K0K1A5 114 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 FAM231BA6NCW3 169 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
CHMP4A-204ENST00000530996 FCER1GP30273 86 aa9.84□□□□□ -0.83
CHMP4A-204ENST00000530996 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
CHMP4A-204ENST00000530996 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 TMEM250H0YL14 139 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 GAS8-AS1O95177 125 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 ESDP10768 282 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 PTTG1IPP53801 180 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 FAM231DQ6ZW35 169 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 MRPL52Q86TS9 123 aaKnown RBP9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 ZNF664Q8N3J9 261 aa9.83□□□□□ -0.84
CHMP4A-204ENST00000530996 TNXBP22105 4242 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 IGLV4-69A0A075B6H9 119 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 COX7A2LO14548 114 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 RPL18AQ02543 176 aaKnown RBP9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CT83Q5H943 113 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CAMK2N2Q96S95 79 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 CDC42SE2Q9NRR3 84 aa9.82□□□□□ -0.84
CHMP4A-204ENST00000530996 RNF213Q63HN8 5207 aa9.81□□□□□ -0.84
CHMP4A-204ENST00000530996 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
CHMP4A-204ENST00000530996 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 MT-ND6P03923 174 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 SMAGPQ0VAQ4 97 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 ALKAL2Q6UX46 152 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 SMIM7Q9BQ49 75 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 TMEM191AQ9H0A3 160 aa9.8□□□□□ -0.84
CHMP4A-204ENST00000530996 TRBV27A0A0K0K1C4 114 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 C1orf196B1AJZ1 125 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 BLOC1S1P78537 153 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
CHMP4A-204ENST00000530996 APOMO95445 188 aa9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 EIF5A2Q9GZV4 153 aaKnown RBP9.78□□□□□ -0.84
CHMP4A-204ENST00000530996 RAB4AP20338 218 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 NUP35Q8NFH5 326 aa9.77□□□□□ -0.85
CHMP4A-204ENST00000530996 VCYO14598 125 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 KRTAP10-8P60410 259 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 SRSF9Q13242 221 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 RIGQ13278 110 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 Q6ZUT4 128 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 C5orf38Q86SI9 138 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 LINC01551Q86U37 167 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
CHMP4A-204ENST00000530996 A0A1W2PNN7 141 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 PPP1R17O96001 155 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 SUMO2P61956 95 aaKnown RBP9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
CHMP4A-204ENST00000530996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
CHMP4A-204ENST00000530996 PPP1R2P9O14990 202 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 C2orf48Q96LS8 159 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 OSTCQ9NRP0 149 aa9.73□□□□□ -0.85
CHMP4A-204ENST00000530996 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 NRACQ8N912 160 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
CHMP4A-204ENST00000530996 OR10D4PQ8NGN7 298 aa9.71□□□□□ -0.86
CHMP4A-204ENST00000530996 NAT8BQ9UHF3 227 aa9.7□□□□□ -0.86
CHMP4A-204ENST00000530996 V9GYV3 84 aa9.7□□□□□ -0.86
CHMP4A-204ENST00000530996 hCG_2014768A0A024R1R8 64 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 A0A087WZ39 114 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 IFITM10A6NMD0 228 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 NDUFA1O15239 70 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 ADIRFQ15847 76 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 MRPL51Q4U2R6 128 aaKnown RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 TIMM21Q9BVV7 248 aa9.68□□□□□ -0.86
CHMP4A-204ENST00000530996 TCAPO15273 167 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 SRP19P09132 144 aaKnown RBP9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 CKS2P33552 79 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
CHMP4A-204ENST00000530996 HBBP68871 147 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 RNF151Q2KHN1 245 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
CHMP4A-204ENST00000530996 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms