RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 ST20Q9HBF5 79 aa12.35□□□□□ -0.43
CTSF-206ENST00000529199 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
CTSF-206ENST00000529199 GAS8-AS1O95177 125 aa12.34□□□□□ -0.43
CTSF-206ENST00000529199 TSHBP01222 138 aa12.34□□□□□ -0.43
CTSF-206ENST00000529199 GAGE2BQ13066 116 aa12.34□□□□□ -0.43
CTSF-206ENST00000529199 MRAP2Q96G30 205 aa12.34□□□□□ -0.43
CTSF-206ENST00000529199 TRBV6-5A0A0K0K1A5 114 aa12.33□□□□□ -0.44
CTSF-206ENST00000529199 ESDP10768 282 aa12.33□□□□□ -0.44
CTSF-206ENST00000529199 TAGLN2P37802 199 aaKnown RBP12.33□□□□□ -0.44
CTSF-206ENST00000529199 CD164L2Q6UWJ8 174 aa12.33□□□□□ -0.44
CTSF-206ENST00000529199 CDC42SE2Q9NRR3 84 aa12.33□□□□□ -0.44
CTSF-206ENST00000529199 A8MWL6 223 aa12.32□□□□□ -0.44
CTSF-206ENST00000529199 ZNF664Q8N3J9 261 aa12.32□□□□□ -0.44
CTSF-206ENST00000529199 BORCS7Q96B45 105 aa12.32□□□□□ -0.44
CTSF-206ENST00000529199 CAMPP49913 170 aa12.31□□□□□ -0.44
CTSF-206ENST00000529199 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
CTSF-206ENST00000529199 ISOC2Q96AB3 205 aa12.31□□□□□ -0.44
CTSF-206ENST00000529199 LOC107984640A0A0U1RRK4 108 aa12.3□□□□□ -0.44
CTSF-206ENST00000529199 MALP21145 153 aa12.3□□□□□ -0.44
CTSF-206ENST00000529199 MRPL52Q86TS9 123 aaKnown RBP12.3□□□□□ -0.44
CTSF-206ENST00000529199 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
CTSF-206ENST00000529199 CEBPGP53567 150 aa12.29□□□□□ -0.44
CTSF-206ENST00000529199 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
CTSF-206ENST00000529199 A0A1W2PNN7 141 aa12.28□□□□□ -0.44
CTSF-206ENST00000529199 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
CTSF-206ENST00000529199 COX7A2LO14548 114 aa12.27□□□□□ -0.45
CTSF-206ENST00000529199 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.45
CTSF-206ENST00000529199 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
CTSF-206ENST00000529199 CAMK2N2Q96S95 79 aa12.27□□□□□ -0.45
CTSF-206ENST00000529199 C1orf196B1AJZ1 125 aa12.26□□□□□ -0.45
CTSF-206ENST00000529199 FAM210AQ96ND0 272 aa12.26□□□□□ -0.45
CTSF-206ENST00000529199 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 TMEM250H0YL14 139 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 MT-ND6P03923 174 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 RAB4AP20338 218 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 FCER1GP30273 86 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
CTSF-206ENST00000529199 TMEM191AQ9H0A3 160 aa12.25□□□□□ -0.45
CTSF-206ENST00000529199 VCYO14598 125 aa12.24□□□□□ -0.45
CTSF-206ENST00000529199 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
CTSF-206ENST00000529199 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
CTSF-206ENST00000529199 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
CTSF-206ENST00000529199 PSORS1C2Q9UIG4 136 aa12.24□□□□□ -0.45
CTSF-206ENST00000529199 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 SMKR1H3BMG3 65 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 APOMO95445 188 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 RPL18AQ02543 176 aaKnown RBP12.23□□□□□ -0.45
CTSF-206ENST00000529199 CT83Q5H943 113 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
CTSF-206ENST00000529199 TSKUQ8WUA8 353 aa12.22□□□□□ -0.45
CTSF-206ENST00000529199 OPRPNQ99935 248 aaPredicted RBP12.22□□□□□ -0.45
CTSF-206ENST00000529199 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.45
CTSF-206ENST00000529199 C1orf137Q5JT78 98 aa12.21□□□□□ -0.45
CTSF-206ENST00000529199 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
CTSF-206ENST00000529199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
CTSF-206ENST00000529199 TCTE3Q8IZS6 198 aa12.2□□□□□ -0.46
CTSF-206ENST00000529199 C2orf48Q96LS8 159 aa12.2□□□□□ -0.46
CTSF-206ENST00000529199 UBE2D4Q9Y2X8 147 aa12.2□□□□□ -0.46
CTSF-206ENST00000529199 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
CTSF-206ENST00000529199 CSDC2Q9Y534 153 aaKnown RBP12.19□□□□□ -0.46
CTSF-206ENST00000529199 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
CTSF-206ENST00000529199 KIR2DL4Q99706 377 aa12.18□□□□□ -0.46
CTSF-206ENST00000529199 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
CTSF-206ENST00000529199 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
CTSF-206ENST00000529199 SPAG11BQ08648 103 aa12.17□□□□□ -0.46
CTSF-206ENST00000529199 RIGQ13278 110 aa12.17□□□□□ -0.46
CTSF-206ENST00000529199 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
CTSF-206ENST00000529199 LPAP08519 4548 aa12.16□□□□□ -0.46
CTSF-206ENST00000529199 PPP1R17O96001 155 aa12.16□□□□□ -0.46
CTSF-206ENST00000529199 Q6ZUT4 128 aa12.16□□□□□ -0.46
CTSF-206ENST00000529199 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
CTSF-206ENST00000529199 PRR26Q8N8Z3 221 aa12.15□□□□□ -0.46
CTSF-206ENST00000529199 NRACQ8N912 160 aa12.15□□□□□ -0.46
CTSF-206ENST00000529199 OSTCQ9NRP0 149 aa12.15□□□□□ -0.46
CTSF-206ENST00000529199 ZNF727A8MUV8 499 aa12.14□□□□□ -0.47
CTSF-206ENST00000529199 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
CTSF-206ENST00000529199 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
CTSF-206ENST00000529199 A0A087WZ39 114 aa12.13□□□□□ -0.47
CTSF-206ENST00000529199 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
CTSF-206ENST00000529199 PPP1R2P9O14990 202 aa12.12□□□□□ -0.47
CTSF-206ENST00000529199 IGLV7-43P04211 117 aa12.12□□□□□ -0.47
CTSF-206ENST00000529199 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
CTSF-206ENST00000529199 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
CTSF-206ENST00000529199 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
CTSF-206ENST00000529199 MRPL51Q4U2R6 128 aaKnown RBP12.11□□□□□ -0.47
CTSF-206ENST00000529199 V9GYV3 84 aa12.11□□□□□ -0.47
CTSF-206ENST00000529199 FAM168BA1KXE4 195 aa12.1□□□□□ -0.47
CTSF-206ENST00000529199 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
CTSF-206ENST00000529199 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
CTSF-206ENST00000529199 MRPL35Q9NZE8 188 aaKnown RBP12.1□□□□□ -0.47
CTSF-206ENST00000529199 NDUFA1O15239 70 aa12.09□□□□□ -0.47
CTSF-206ENST00000529199 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
CTSF-206ENST00000529199 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
CTSF-206ENST00000529199 C10orf25Q5T742 122 aa12.08□□□□□ -0.48
CTSF-206ENST00000529199 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.48
CTSF-206ENST00000529199 SRP19P09132 144 aaKnown RBP12.07□□□□□ -0.48
CTSF-206ENST00000529199 CKS2P33552 79 aa12.07□□□□□ -0.48
CTSF-206ENST00000529199 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms