RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SS18Q15532 418 aa14.79□□□□□ -0.04
USP47-205ENST00000525257 GAS8-AS1O95177 125 aa14.78□□□□□ -0.04
USP47-205ENST00000525257 ESDP10768 282 aa14.78□□□□□ -0.04
USP47-205ENST00000525257 PTTG1IPP53801 180 aa14.78□□□□□ -0.04
USP47-205ENST00000525257 GAGE2BQ13066 116 aa14.78□□□□□ -0.04
USP47-205ENST00000525257 MRAP2Q96G30 205 aa14.78□□□□□ -0.04
USP47-205ENST00000525257 TRBV6-5A0A0K0K1A5 114 aa14.77□□□□□ -0.05
USP47-205ENST00000525257 CAMPP49913 170 aa14.77□□□□□ -0.05
USP47-205ENST00000525257 CD164L2Q6UWJ8 174 aa14.77□□□□□ -0.05
USP47-205ENST00000525257 CDC42SE2Q9NRR3 84 aa14.76□□□□□ -0.05
USP47-205ENST00000525257 LPAP08519 4548 aa14.76□□□□□ -0.05
USP47-205ENST00000525257 LOC107984640A0A0U1RRK4 108 aa14.75□□□□□ -0.05
USP47-205ENST00000525257 GATCO43716 136 aaKnown RBP14.75□□□□□ -0.05
USP47-205ENST00000525257 ST20Q9HBF5 79 aa14.75□□□□□ -0.05
USP47-205ENST00000525257 ZNF664Q8N3J9 261 aa14.74□□□□□ -0.05
USP47-205ENST00000525257 IGLV4-69A0A075B6H9 119 aa14.73□□□□□ -0.05
USP47-205ENST00000525257 A0A1W2PNN7 141 aa14.73□□□□□ -0.05
USP47-205ENST00000525257 TAGLN2P37802 199 aaKnown RBP14.73□□□□□ -0.05
USP47-205ENST00000525257 MRPL52Q86TS9 123 aaKnown RBP14.73□□□□□ -0.05
USP47-205ENST00000525257 ISOC2Q96AB3 205 aa14.73□□□□□ -0.05
USP47-205ENST00000525257 A8MWL6 223 aa14.71□□□□□ -0.05
USP47-205ENST00000525257 MALP21145 153 aa14.71□□□□□ -0.05
USP47-205ENST00000525257 C7orf77A4D0Y5 90 aa14.7□□□□□ -0.06
USP47-205ENST00000525257 PSORS1C2Q9UIG4 136 aa14.7□□□□□ -0.06
USP47-205ENST00000525257 COX7A2LO14548 114 aa14.69□□□□□ -0.06
USP47-205ENST00000525257 POLR2KP53803 58 aaKnown RBP14.69□□□□□ -0.06
USP47-205ENST00000525257 NUP35Q8NFH5 326 aa14.69□□□□□ -0.06
USP47-205ENST00000525257 BORCS7Q96B45 105 aa14.69□□□□□ -0.06
USP47-205ENST00000525257 CAMK2N2Q96S95 79 aa14.69□□□□□ -0.06
USP47-205ENST00000525257 MT-ND6P03923 174 aa14.68□□□□□ -0.06
USP47-205ENST00000525257 FAM231DQ6ZW35 169 aa14.68□□□□□ -0.06
USP47-205ENST00000525257 FAM210AQ96ND0 272 aa14.68□□□□□ -0.06
USP47-205ENST00000525257 TRBV27A0A0K0K1C4 114 aa14.67□□□□□ -0.06
USP47-205ENST00000525257 APOMO95445 188 aa14.67□□□□□ -0.06
USP47-205ENST00000525257 C9orf116Q5BN46 136 aaPredicted RBP14.67□□□□□ -0.06
USP47-205ENST00000525257 RNASE13Q5GAN3 156 aaKnown RBP14.67□□□□□ -0.06
USP47-205ENST00000525257 C1orf196B1AJZ1 125 aa14.66□□□□□ -0.06
USP47-205ENST00000525257 RPL18AQ02543 176 aaKnown RBP14.66□□□□□ -0.06
USP47-205ENST00000525257 SLC51BQ86UW2 128 aa14.66□□□□□ -0.06
USP47-205ENST00000525257 TMEM191AQ9H0A3 160 aa14.66□□□□□ -0.06
USP47-205ENST00000525257 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.65□□□□□ -0.06
USP47-205ENST00000525257 CT83Q5H943 113 aa14.65□□□□□ -0.06
USP47-205ENST00000525257 C1orf137Q5JT78 98 aa14.65□□□□□ -0.06
USP47-205ENST00000525257 PHF5AQ7RTV0 110 aaKnown RBP14.65□□□□□ -0.06
USP47-205ENST00000525257 A0A1B0GUT8 65 aa14.64□□□□□ -0.07
USP47-205ENST00000525257 RAB4AP20338 218 aa14.64□□□□□ -0.07
USP47-205ENST00000525257 FCER1GP30273 86 aa14.64□□□□□ -0.07
USP47-205ENST00000525257 CEBPGP53567 150 aa14.64□□□□□ -0.07
USP47-205ENST00000525257 TRAV13-1A0A0B4J241 112 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 TMEM250H0YL14 139 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 SMKR1H3BMG3 65 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 C5orf38Q86SI9 138 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 AMN1Q8IY45 258 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 C2orf48Q96LS8 159 aa14.63□□□□□ -0.07
USP47-205ENST00000525257 HIGD1CA8MV81 97 aa14.62□□□□□ -0.07
USP47-205ENST00000525257 OPRPNQ99935 248 aaPredicted RBP14.62□□□□□ -0.07
USP47-205ENST00000525257 UBE2D4Q9Y2X8 147 aa14.62□□□□□ -0.07
USP47-205ENST00000525257 VCYO14598 125 aa14.6□□□□□ -0.07
USP47-205ENST00000525257 SPAG11BQ08648 103 aa14.6□□□□□ -0.07
USP47-205ENST00000525257 Q6ZUT4 128 aa14.6□□□□□ -0.07
USP47-205ENST00000525257 TSKUQ8WUA8 353 aa14.6□□□□□ -0.07
USP47-205ENST00000525257 CSDC2Q9Y534 153 aaKnown RBP14.6□□□□□ -0.07
USP47-205ENST00000525257 PRR26Q8N8Z3 221 aa14.59□□□□□ -0.07
USP47-205ENST00000525257 SMAGPQ0VAQ4 97 aa14.58□□□□□ -0.08
USP47-205ENST00000525257 SUMO2P61956 95 aaKnown RBP14.56□□□□□ -0.08
USP47-205ENST00000525257 TCTE3Q8IZS6 198 aa14.56□□□□□ -0.08
USP47-205ENST00000525257 NRACQ8N912 160 aa14.56□□□□□ -0.08
USP47-205ENST00000525257 KIR2DL4Q99706 377 aa14.56□□□□□ -0.08
USP47-205ENST00000525257 IGLV7-43P04211 117 aa14.55□□□□□ -0.08
USP47-205ENST00000525257 RNF151Q2KHN1 245 aa14.55□□□□□ -0.08
USP47-205ENST00000525257 LINC01551Q86U37 167 aa14.55□□□□□ -0.08
USP47-205ENST00000525257 DIRC1Q969H9 104 aa14.55□□□□□ -0.08
USP47-205ENST00000525257 SMIM7Q9BQ49 75 aa14.55□□□□□ -0.08
USP47-205ENST00000525257 OR10D4PQ8NGN7 298 aa14.53□□□□□ -0.08
USP47-205ENST00000525257 A0A087WZ39 114 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 FAM168BA1KXE4 195 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 PPP1R17O96001 155 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 BLOC1S1P78537 153 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 RIGQ13278 110 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 ALKAL2Q6UX46 152 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 ORAOV1Q8WV07 137 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 OSTCQ9NRP0 149 aa14.52□□□□□ -0.09
USP47-205ENST00000525257 KRTAP11-1Q8IUC1 163 aa14.51□□□□□ -0.09
USP47-205ENST00000525257 TMEM18Q96B42 140 aa14.51□□□□□ -0.09
USP47-205ENST00000525257 TIMM21Q9BVV7 248 aa14.51□□□□□ -0.09
USP47-205ENST00000525257 MRPL35Q9NZE8 188 aaKnown RBP14.51□□□□□ -0.09
USP47-205ENST00000525257 H0Y9J4 135 aa14.5□□□□□ -0.09
USP47-205ENST00000525257 PPP1R2P9O14990 202 aa14.49□□□□□ -0.09
USP47-205ENST00000525257 FAM19A5Q7Z5A7 132 aaPredicted RBP14.49□□□□□ -0.09
USP47-205ENST00000525257 IMMP2LQ96T52 175 aa14.49□□□□□ -0.09
USP47-205ENST00000525257 V9GYV3 84 aa14.49□□□□□ -0.09
USP47-205ENST00000525257 ZNF727A8MUV8 499 aa14.48□□□□□ -0.09
USP47-205ENST00000525257 RPL39P62891 51 aaKnown RBP14.48□□□□□ -0.09
USP47-205ENST00000525257 MRPL51Q4U2R6 128 aaKnown RBP14.48□□□□□ -0.09
USP47-205ENST00000525257 C10orf25Q5T742 122 aa14.48□□□□□ -0.09
USP47-205ENST00000525257 EIF5A2Q9GZV4 153 aaKnown RBP14.48□□□□□ -0.09
USP47-205ENST00000525257 NDUFA1O15239 70 aa14.47□□□□□ -0.09
USP47-205ENST00000525257 IGHV3OR16-9A0A0B4J2B5 98 aa14.45□□□□□ -0.1
USP47-205ENST00000525257 F8WDY8 70 aa14.45□□□□□ -0.1
USP47-205ENST00000525257 FAM104BQ5XKR9 115 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms