RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 F8W036 122 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 FCER1GP30273 86 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 XCL1P47992 114 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 RIGQ13278 110 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 HIGD2BQ4VC39 106 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 C15orf56Q8N910 161 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 SEC11CQ9BY50 192 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 TMEM191AQ9H0A3 160 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 TMEM242Q9NWH2 141 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 V9GYV3 84 aa5.67□□□□□ -1.5
CTNNA1-240ENST00000523912 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
CTNNA1-240ENST00000523912 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
CTNNA1-240ENST00000523912 SS18Q15532 418 aa5.66□□□□□ -1.5
CTNNA1-240ENST00000523912 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
CTNNA1-240ENST00000523912 A0A087WYN8 130 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 IGHV1-58A0A0C4DH39 117 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 PANO1I0J062 215 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 PPP1R2P9O14990 202 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 TSHBP01222 138 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 CHTF8P0CG12 524 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 COX6A2Q02221 97 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 MAJINQ3KP22 176 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 KIR2DL4Q99706 377 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 NAT8BQ9UHF3 227 aa5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 CARHSP1Q9Y2V2 147 aaKnown RBP5.65□□□□□ -1.5
CTNNA1-240ENST00000523912 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.51
CTNNA1-240ENST00000523912 IGKV2-24A0A0C4DH68 120 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 VCYO14598 125 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 CCL25O15444 150 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 MT-ND4LP03901 98 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 SLPIP03973 132 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 FOXI1Q12951 378 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 C10orf91Q5T1B1 145 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 Q6ZRU5 148 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 MRPL52Q86TS9 123 aaKnown RBP5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 AMN1Q8IY45 258 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 CARD19Q96LW7 228 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
CTNNA1-240ENST00000523912 PKHD1L1Q86WI1 4243 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 LINC00959A0A1B0GUT2 108 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 A0A1B0GW15 77 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 SMIM27A0A1W2PRY6 76 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 TCAPO15273 167 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 S100A8P05109 93 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 ESDP10768 282 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 RAB4AP20338 218 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 MALP21145 153 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 RHEBQ15382 184 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 CD164L2Q6UWJ8 174 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 ZNF664Q8N3J9 261 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 TMEM18Q96B42 140 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 ANAPC16Q96DE5 110 aa5.63□□□□□ -1.51
CTNNA1-240ENST00000523912 HNRNPA3P51991 378 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 STPG4Q8N801 248 aa5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 NUP35Q8NFH5 326 aa5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 CTDSP1Q9GZU7 261 aa5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
CTNNA1-240ENST00000523912 C1orf196B1AJZ1 125 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 SMKR1H3BMG3 65 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 COX7A2LO14548 114 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 PHOX2AO14813 284 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 CAMPP49913 170 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 SYCNQ0VAF6 134 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 SVBPQ8N300 66 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 CSDC2Q9Y534 153 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-240ENST00000523912 A0A096LNI7 61 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 APOMO95445 188 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 APOC3P02656 99 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 CKS2P33552 79 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 PRR3P79522 188 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 FAM104BQ5XKR9 115 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 ATP5L2Q7Z4Y8 100 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 NRACQ8N912 160 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 IMMP2LQ96T52 175 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
CTNNA1-240ENST00000523912 TRAV13-1A0A0B4J241 112 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 SNAPINO95295 136 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 HBBP68871 147 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 MRPL51Q4U2R6 128 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 SLC7A5P1Q8MH63 180 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 TIMM21Q9BVV7 248 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.51
CTNNA1-240ENST00000523912 TRAV9-1A0A075B6T8 112 aa5.58□□□□□ -1.52
CTNNA1-240ENST00000523912 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
CTNNA1-240ENST00000523912 RPL32P62910 135 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-240ENST00000523912 Q6ZUT4 128 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms