RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 FAT3Q8TDW7 4589 aa7.88□□□□□ -1.15
VEGFA-223ENST00000523125 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 SMIM27A0A1W2PRY6 76 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 ADIRFQ15847 76 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 NAT8Q9UHE5 227 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
VEGFA-223ENST00000523125 GVQW2A0A096LPI5 108 aaPredicted RBP7.86□□□□□ -1.15
VEGFA-223ENST00000523125 SPACA4Q8TDM5 124 aa7.86□□□□□ -1.15
VEGFA-223ENST00000523125 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
VEGFA-223ENST00000523125 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
VEGFA-223ENST00000523125 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
VEGFA-223ENST00000523125 A0A087WYN8 130 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 VCYO14598 125 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 CCL25O15444 150 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 XCL1P47992 114 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 SUMO2P61956 95 aaKnown RBP7.85□□□□□ -1.15
VEGFA-223ENST00000523125 PEA15Q15121 130 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
VEGFA-223ENST00000523125 FAM104BQ5XKR9 115 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 SMDT1Q9H4I9 107 aa7.85□□□□□ -1.15
VEGFA-223ENST00000523125 C7orf77A4D0Y5 90 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 OXTP01178 125 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 COX6A2Q02221 97 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 ZNF664Q8N3J9 261 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 PRSS3P2Q8NHM4 247 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
VEGFA-223ENST00000523125 PPP1R17O96001 155 aa7.83□□□□□ -1.16
VEGFA-223ENST00000523125 CAMPP49913 170 aa7.83□□□□□ -1.16
VEGFA-223ENST00000523125 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
VEGFA-223ENST00000523125 CSDC2Q9Y534 153 aaKnown RBP7.83□□□□□ -1.16
VEGFA-223ENST00000523125 TRBV24-1A0A075B6N3 115 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 LINC00862A6NCI5 91 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 FCER1GP30273 86 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 SS18Q15532 418 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 CD164L2Q6UWJ8 174 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
VEGFA-223ENST00000523125 IGHV1-58A0A0C4DH39 117 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 A0A1B0GW15 77 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 A0A1B0GXF2 115 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 PPP1R2P9O14990 202 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 KIR2DL4Q99706 377 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
VEGFA-223ENST00000523125 CKS2P33552 79 aa7.8□□□□□ -1.16
VEGFA-223ENST00000523125 RPL32P62910 135 aaKnown RBP7.8□□□□□ -1.16
VEGFA-223ENST00000523125 RNASE13Q5GAN3 156 aaKnown RBP7.8□□□□□ -1.16
VEGFA-223ENST00000523125 MRPL54Q6P161 138 aaKnown RBP7.8□□□□□ -1.16
VEGFA-223ENST00000523125 FAM104AQ969W3 186 aa7.8□□□□□ -1.16
VEGFA-223ENST00000523125 A0A096LNI7 61 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 C1orf196B1AJZ1 125 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 TNFRSF6BO95407 300 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 HBBP68871 147 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
VEGFA-223ENST00000523125 D6R8Y8 96 aa7.78□□□□□ -1.16
VEGFA-223ENST00000523125 PHOX2AO14813 284 aa7.78□□□□□ -1.16
VEGFA-223ENST00000523125 NPYP01303 97 aa7.78□□□□□ -1.16
VEGFA-223ENST00000523125 RPL39P62891 51 aaKnown RBP7.78□□□□□ -1.16
VEGFA-223ENST00000523125 Q6ZUT4 128 aa7.78□□□□□ -1.16
VEGFA-223ENST00000523125 F8W036 122 aa7.77□□□□□ -1.17
VEGFA-223ENST00000523125 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
VEGFA-223ENST00000523125 STPG4Q8N801 248 aa7.77□□□□□ -1.17
VEGFA-223ENST00000523125 CARD19Q96LW7 228 aa7.77□□□□□ -1.17
VEGFA-223ENST00000523125 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
VEGFA-223ENST00000523125 IGLV4-69A0A075B6H9 119 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 ZNF561-AS1K7EIQ3 104 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 COX7A2LO14548 114 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 S100A8P05109 93 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 MT1HL1P0DM35 61 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 SYCNQ0VAF6 134 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 Q6ZRU5 148 aa7.76□□□□□ -1.17
VEGFA-223ENST00000523125 TCAPO15273 167 aa7.75□□□□□ -1.17
VEGFA-223ENST00000523125 PPBPP02775 128 aa7.75□□□□□ -1.17
VEGFA-223ENST00000523125 ATP5L2Q7Z4Y8 100 aa7.75□□□□□ -1.17
VEGFA-223ENST00000523125 TMEM18Q96B42 140 aa7.75□□□□□ -1.17
VEGFA-223ENST00000523125 OPRPNQ99935 248 aaPredicted RBP7.75□□□□□ -1.17
VEGFA-223ENST00000523125 HMCN2Q8NDA2 5059 aa7.75□□□□□ -1.17
VEGFA-223ENST00000523125 MALP21145 153 aa7.74□□□□□ -1.17
VEGFA-223ENST00000523125 SERTAD4-AS1Q5TG53 156 aa7.74□□□□□ -1.17
VEGFA-223ENST00000523125 C5orf38Q86SI9 138 aa7.74□□□□□ -1.17
VEGFA-223ENST00000523125 C7orf33Q8WU49 177 aa7.74□□□□□ -1.17
VEGFA-223ENST00000523125 LINC00474Q9P2X8 69 aa7.74□□□□□ -1.17
VEGFA-223ENST00000523125 MRPS36P82909 103 aaKnown RBP7.73□□□□□ -1.17
VEGFA-223ENST00000523125 TMEM136Q6ZRR5 245 aa7.73□□□□□ -1.17
VEGFA-223ENST00000523125 ORMDL3Q8N138 153 aa7.73□□□□□ -1.17
VEGFA-223ENST00000523125 SPANXA1Q9NS26 97 aa7.73□□□□□ -1.17
VEGFA-223ENST00000523125 IGHV3OR16-9A0A0B4J2B5 98 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PTTG1IPP53801 180 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PRR3P79522 188 aaKnown RBP7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PNRC1Q12796 327 aaPredicted RBP7.72□□□□□ -1.17
VEGFA-223ENST00000523125 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PRELID3AQ96N28 172 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
VEGFA-223ENST00000523125 LOC107984640A0A0U1RRK4 108 aa7.71□□□□□ -1.18
VEGFA-223ENST00000523125 CAMK2N2Q96S95 79 aa7.71□□□□□ -1.18
VEGFA-223ENST00000523125 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms