RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ALKAL2Q6UX46 152 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 MRAP2Q96G30 205 aa9.59□□□□□ -0.87
MRPS28-209ENST00000522987 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
MRPS28-209ENST00000522987 TAGLN2P37802 199 aaKnown RBP9.58□□□□□ -0.88
MRPS28-209ENST00000522987 SYCNQ0VAF6 134 aa9.58□□□□□ -0.88
MRPS28-209ENST00000522987 BORCS7Q96B45 105 aa9.58□□□□□ -0.88
MRPS28-209ENST00000522987 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 A0A0J9YXV3 536 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 TRBV6-5A0A0K0K1A5 114 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 TCTE3Q8IZS6 198 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 CDC42SE2Q9NRR3 84 aa9.57□□□□□ -0.88
MRPS28-209ENST00000522987 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
MRPS28-209ENST00000522987 CAMPP49913 170 aa9.56□□□□□ -0.88
MRPS28-209ENST00000522987 FAM231DQ6ZW35 169 aa9.56□□□□□ -0.88
MRPS28-209ENST00000522987 ZNF664Q8N3J9 261 aa9.56□□□□□ -0.88
MRPS28-209ENST00000522987 C7orf77A4D0Y5 90 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 RAB4AP20338 218 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 MALP21145 153 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 REG3GQ6UW15 175 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
MRPS28-209ENST00000522987 A0A1B0GUT8 65 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 PTTG1IPP53801 180 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
MRPS28-209ENST00000522987 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 Q6ZRP5 223 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 SMIM7Q9BQ49 75 aa9.54□□□□□ -0.88
MRPS28-209ENST00000522987 TRAV13-1A0A0B4J241 112 aa9.53□□□□□ -0.88
MRPS28-209ENST00000522987 FCER1GP30273 86 aa9.53□□□□□ -0.88
MRPS28-209ENST00000522987 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
MRPS28-209ENST00000522987 MRPL52Q86TS9 123 aaKnown RBP9.53□□□□□ -0.88
MRPS28-209ENST00000522987 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
MRPS28-209ENST00000522987 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 LOC107984640A0A0U1RRK4 108 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 COX7A2LO14548 114 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 BLOC1S1P78537 153 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 RPL18AQ02543 176 aaKnown RBP9.52□□□□□ -0.89
MRPS28-209ENST00000522987 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
MRPS28-209ENST00000522987 CT83Q5H943 113 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 Q6ZUT4 128 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 TSKUQ8WUA8 353 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 CAMK2N2Q96S95 79 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
MRPS28-209ENST00000522987 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
MRPS28-209ENST00000522987 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
MRPS28-209ENST00000522987 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
MRPS28-209ENST00000522987 LINC01551Q86U37 167 aa9.51□□□□□ -0.89
MRPS28-209ENST00000522987 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
MRPS28-209ENST00000522987 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
MRPS28-209ENST00000522987 PHF5AQ7RTV0 110 aaKnown RBP9.5□□□□□ -0.89
MRPS28-209ENST00000522987 NUP35Q8NFH5 326 aa9.5□□□□□ -0.89
MRPS28-209ENST00000522987 ISOC2Q96AB3 205 aa9.5□□□□□ -0.89
MRPS28-209ENST00000522987 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
MRPS28-209ENST00000522987 C1orf196B1AJZ1 125 aa9.49□□□□□ -0.89
MRPS28-209ENST00000522987 VCYO14598 125 aa9.49□□□□□ -0.89
MRPS28-209ENST00000522987 NRACQ8N912 160 aa9.49□□□□□ -0.89
MRPS28-209ENST00000522987 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
MRPS28-209ENST00000522987 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
MRPS28-209ENST00000522987 MT-ND6P03923 174 aa9.48□□□□□ -0.89
MRPS28-209ENST00000522987 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
MRPS28-209ENST00000522987 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
MRPS28-209ENST00000522987 RIGQ13278 110 aa9.48□□□□□ -0.89
MRPS28-209ENST00000522987 OSTCQ9NRP0 149 aa9.48□□□□□ -0.89
MRPS28-209ENST00000522987 V9GYV3 84 aa9.48□□□□□ -0.89
MRPS28-209ENST00000522987 APOMO95445 188 aa9.47□□□□□ -0.89
MRPS28-209ENST00000522987 SRP19P09132 144 aaKnown RBP9.47□□□□□ -0.89
MRPS28-209ENST00000522987 RPL39P62891 51 aaKnown RBP9.46□□□□□ -0.9
MRPS28-209ENST00000522987 MRPL51Q4U2R6 128 aaKnown RBP9.46□□□□□ -0.9
MRPS28-209ENST00000522987 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
MRPS28-209ENST00000522987 AKAP14Q86UN6 197 aa9.46□□□□□ -0.9
MRPS28-209ENST00000522987 KIR2DL4Q99706 377 aa9.46□□□□□ -0.9
MRPS28-209ENST00000522987 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
MRPS28-209ENST00000522987 FAM168BA1KXE4 195 aa9.44□□□□□ -0.9
MRPS28-209ENST00000522987 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
MRPS28-209ENST00000522987 ADIRFQ15847 76 aa9.43□□□□□ -0.9
MRPS28-209ENST00000522987 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
MRPS28-209ENST00000522987 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
MRPS28-209ENST00000522987 RPL23P62829 140 aaKnown RBP9.42□□□□□ -0.9
MRPS28-209ENST00000522987 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 FAM104BQ5XKR9 115 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 PRR26Q8N8Z3 221 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 NAT8BQ9UHF3 227 aa9.42□□□□□ -0.9
MRPS28-209ENST00000522987 PPP1R2P9O14990 202 aa9.41□□□□□ -0.9
MRPS28-209ENST00000522987 CKS2P33552 79 aa9.41□□□□□ -0.9
MRPS28-209ENST00000522987 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
MRPS28-209ENST00000522987 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
MRPS28-209ENST00000522987 TMEM18Q96B42 140 aa9.41□□□□□ -0.9
MRPS28-209ENST00000522987 A0A087WZ39 114 aa9.4□□□□□ -0.9
MRPS28-209ENST00000522987 TCAPO15273 167 aa9.4□□□□□ -0.9
MRPS28-209ENST00000522987 PPP1R17O96001 155 aa9.4□□□□□ -0.9
MRPS28-209ENST00000522987 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.9
MRPS28-209ENST00000522987 MRPL54Q6P161 138 aaKnown RBP9.4□□□□□ -0.9
MRPS28-209ENST00000522987 UNQ6190/PRO20217Q6UXQ8 127 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms