RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 LINC00959A0A1B0GUT2 108 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 POLR2KP53803 58 aaKnown RBP10.05□□□□□ -0.8
CLN8-205ENST00000520991 SS18Q15532 418 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 TMEM241Q24JQ0 296 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 FAM74A3Q4VXF1 159 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 NUP35Q8NFH5 326 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
CLN8-205ENST00000520991 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 SMKR1H3BMG3 65 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 FCER1GP30273 86 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 ADIRFQ15847 76 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
CLN8-205ENST00000520991 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 C7orf33Q8WU49 177 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
CLN8-205ENST00000520991 IGHV1-58A0A0C4DH39 117 aa10.03□□□□□ -0.8
CLN8-205ENST00000520991 VCYO14598 125 aa10.03□□□□□ -0.8
CLN8-205ENST00000520991 PPP1R17O96001 155 aa10.03□□□□□ -0.8
CLN8-205ENST00000520991 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
CLN8-205ENST00000520991 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
CLN8-205ENST00000520991 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.81
CLN8-205ENST00000520991 PHOX2AO14813 284 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 SUMO2P61956 95 aaKnown RBP10.01□□□□□ -0.81
CLN8-205ENST00000520991 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 CD164L2Q6UWJ8 174 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 Q6ZRU5 148 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 NRACQ8N912 160 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 NAT8Q9UHE5 227 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 PKIGQ9Y2B9 76 aa10.01□□□□□ -0.81
CLN8-205ENST00000520991 A0A1B0GVG6 124 aa10□□□□□ -0.81
CLN8-205ENST00000520991 PPP1R2P9O14990 202 aa10□□□□□ -0.81
CLN8-205ENST00000520991 STPG4Q8N801 248 aa10□□□□□ -0.81
CLN8-205ENST00000520991 LINC00526Q96FQ7 95 aa10□□□□□ -0.81
CLN8-205ENST00000520991 CARD19Q96LW7 228 aa10□□□□□ -0.81
CLN8-205ENST00000520991 A0A096LNI7 61 aa9.99□□□□□ -0.81
CLN8-205ENST00000520991 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
CLN8-205ENST00000520991 CAMPP49913 170 aa9.99□□□□□ -0.81
CLN8-205ENST00000520991 PEA15Q15121 130 aa9.99□□□□□ -0.81
CLN8-205ENST00000520991 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
CLN8-205ENST00000520991 LINC00474Q9P2X8 69 aa9.99□□□□□ -0.81
CLN8-205ENST00000520991 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
CLN8-205ENST00000520991 C9JQL5 133 aa9.98□□□□□ -0.81
CLN8-205ENST00000520991 MALP21145 153 aa9.98□□□□□ -0.81
CLN8-205ENST00000520991 FAM104BQ5XKR9 115 aa9.98□□□□□ -0.81
CLN8-205ENST00000520991 HMCN2Q8NDA2 5059 aa9.98□□□□□ -0.81
CLN8-205ENST00000520991 C1orf196B1AJZ1 125 aa9.97□□□□□ -0.81
CLN8-205ENST00000520991 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
CLN8-205ENST00000520991 TMEM18Q96B42 140 aa9.97□□□□□ -0.81
CLN8-205ENST00000520991 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
CLN8-205ENST00000520991 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
CLN8-205ENST00000520991 A0A1B0GW15 77 aa9.96□□□□□ -0.82
CLN8-205ENST00000520991 LINC00862A6NCI5 91 aa9.96□□□□□ -0.82
CLN8-205ENST00000520991 COX7A2LO14548 114 aa9.96□□□□□ -0.82
CLN8-205ENST00000520991 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
CLN8-205ENST00000520991 SYCNQ0VAF6 134 aa9.96□□□□□ -0.82
CLN8-205ENST00000520991 PLA2G2DQ9UNK4 145 aa9.96□□□□□ -0.82
CLN8-205ENST00000520991 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
CLN8-205ENST00000520991 CKS2P33552 79 aa9.95□□□□□ -0.82
CLN8-205ENST00000520991 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
CLN8-205ENST00000520991 SMDT1Q9H4I9 107 aa9.95□□□□□ -0.82
CLN8-205ENST00000520991 S100A8P05109 93 aa9.94□□□□□ -0.82
CLN8-205ENST00000520991 Q6ZUT4 128 aa9.94□□□□□ -0.82
CLN8-205ENST00000520991 IGLV4-69A0A075B6H9 119 aa9.93□□□□□ -0.82
CLN8-205ENST00000520991 F8W036 122 aa9.93□□□□□ -0.82
CLN8-205ENST00000520991 TCAPO15273 167 aa9.93□□□□□ -0.82
CLN8-205ENST00000520991 HBBP68871 147 aa9.93□□□□□ -0.82
CLN8-205ENST00000520991 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
CLN8-205ENST00000520991 MRPL54Q6P161 138 aaKnown RBP9.93□□□□□ -0.82
CLN8-205ENST00000520991 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
CLN8-205ENST00000520991 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
CLN8-205ENST00000520991 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
CLN8-205ENST00000520991 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
CLN8-205ENST00000520991 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
CLN8-205ENST00000520991 D6R8Y8 96 aa9.91□□□□□ -0.82
CLN8-205ENST00000520991 APOMO95445 188 aa9.91□□□□□ -0.82
CLN8-205ENST00000520991 C5orf38Q86SI9 138 aa9.91□□□□□ -0.82
CLN8-205ENST00000520991 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
CLN8-205ENST00000520991 SMIM2Q9BVW6 85 aa9.91□□□□□ -0.82
CLN8-205ENST00000520991 LOC107984640A0A0U1RRK4 108 aa9.9□□□□□ -0.82
CLN8-205ENST00000520991 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
CLN8-205ENST00000520991 RPL39P62891 51 aaKnown RBP9.9□□□□□ -0.82
CLN8-205ENST00000520991 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
CLN8-205ENST00000520991 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
CLN8-205ENST00000520991 A0A1B0GXF2 115 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 NPYP01303 97 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 PPBPP02775 128 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 SPAG11BQ08648 103 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 C2orf48Q96LS8 159 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
CLN8-205ENST00000520991 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
CLN8-205ENST00000520991 ATP5L2Q7Z4Y8 100 aa9.86□□□□□ -0.83
CLN8-205ENST00000520991 ORMDL3Q8N138 153 aa9.86□□□□□ -0.83
CLN8-205ENST00000520991 IFITM10A6NMD0 228 aa9.85□□□□□ -0.83
CLN8-205ENST00000520991 RAB5AP20339 215 aa9.85□□□□□ -0.83
CLN8-205ENST00000520991 MRPS36P82909 103 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms