RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SRSF3P84103 164 aaKnown RBP5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 FAM231DQ6ZW35 169 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 LINC01551Q86U37 167 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 FAM210AQ96ND0 272 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 SMIM7Q9BQ49 75 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 TMEM243Q9BU79 118 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 PKIGQ9Y2B9 76 aa5.14□□□□□ -1.59
CTNNA1-215ENST00000519309 AMTP48728 403 aa5.13□□□□□ -1.59
CTNNA1-215ENST00000519309 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
CTNNA1-215ENST00000519309 EIF5A2Q9GZV4 153 aaKnown RBP5.13□□□□□ -1.59
CTNNA1-215ENST00000519309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 IGKV2-29A2NJV5 120 aaPredicted RBP5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 HIGD1CA8MV81 97 aa5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 COTL1Q14019 142 aa5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 HIGD2BQ4VC39 106 aa5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 CT83Q5H943 113 aa5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 V9GYV3 84 aa5.12□□□□□ -1.59
CTNNA1-215ENST00000519309 SDHAF1A6NFY7 115 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 ZNF727A8MUV8 499 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 A8MWL6 223 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 SMKR1H3BMG3 65 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 TSHBP01222 138 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 ANKRD39Q53RE8 183 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 TSKUQ8WUA8 353 aa5.11□□□□□ -1.59
CTNNA1-215ENST00000519309 IGKV3OR2-268A0A0C4DH90 116 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 TRBV6-5A0A0K0K1A5 114 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 GAGE12HA6NDE8 117 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 NCR2O95944 276 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 RPL23P62829 140 aaKnown RBP5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 AMN1Q8IY45 258 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 PRR26Q8N8Z3 221 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 ISOC2Q96AB3 205 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 OSTCQ9NRP0 149 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 TMEM242Q9NWH2 141 aa5.1□□□□□ -1.59
CTNNA1-215ENST00000519309 A0A1B0GUT8 65 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 UBE2L6O14933 153 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 FGF6P10767 208 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 RAB4AP20338 218 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 NUP35Q8NFH5 326 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 TMEM191AQ9H0A3 160 aa5.09□□□□□ -1.59
CTNNA1-215ENST00000519309 IGLV1-50A0A075B6I6 118 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 APCSP02743 223 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 ESDP10768 282 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 PTTG1IPP53801 180 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 POLR2KP53803 58 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 PRR4Q16378 134 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 RNASEKQ6P5S7 137 aaKnown RBP5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 TEX261Q6UWH6 196 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 SMIM15Q7Z3B0 74 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 NRACQ8N912 160 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 CARD19Q96LW7 228 aa5.08□□□□□ -1.6
CTNNA1-215ENST00000519309 I3L3M4 83 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 KRTAP1-4P0C5Y4 121 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 PMCHP20382 165 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 FOXI1Q12951 378 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 ADIRFQ15847 76 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 TMEM241Q24JQ0 296 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 CHCHD10Q8WYQ3 142 aaPredicted RBP5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 DIRC1Q969H9 104 aa5.07□□□□□ -1.6
CTNNA1-215ENST00000519309 TRBV27A0A0K0K1C4 114 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 SMIM27A0A1W2PRY6 76 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 H0Y9J4 135 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 LORP23490 312 aaPredicted RBP5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 MRPL51Q4U2R6 128 aaKnown RBP5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 AMMECR1LQ6DCA0 310 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 BORCS7Q96B45 105 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 LINC00526Q96FQ7 95 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 MRAP2Q96G30 205 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 ST20Q9HBF5 79 aa5.06□□□□□ -1.6
CTNNA1-215ENST00000519309 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 H7C423 109 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 CCL25O15444 150 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 MT-ND6P03923 174 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 XCL1P47992 114 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 RIGQ13278 110 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 FAM74A3Q4VXF1 159 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 FAM104BQ5XKR9 115 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 OR5A1Q8NGJ0 315 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 NAT8Q9UHE5 227 aa5.05□□□□□ -1.6
CTNNA1-215ENST00000519309 IGHV1-58A0A0C4DH39 117 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 LOC107984640A0A0U1RRK4 108 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 A0A1B0GXF2 115 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 A0A1W2PNN7 141 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 IGLV7-43P04211 117 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 ZNF25P17030 456 aaPredicted RBP5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 RPL13AP40429 203 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 CAMPP49913 170 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 SUMO2P61956 95 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 SYCNQ0VAF6 134 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 C1orf137Q5JT78 98 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 MRPL52Q86TS9 123 aaKnown RBP5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 FAM104AQ969W3 186 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 CDC42SE2Q9NRR3 84 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 NAT8BQ9UHF3 227 aa5.04□□□□□ -1.6
CTNNA1-215ENST00000519309 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
CTNNA1-215ENST00000519309 C7orf77A4D0Y5 90 aa5.03□□□□□ -1.6
CTNNA1-215ENST00000519309 PEA15Q15121 130 aa5.03□□□□□ -1.6
CTNNA1-215ENST00000519309 MRPL54Q6P161 138 aaKnown RBP5.03□□□□□ -1.6
CTNNA1-215ENST00000519309 Q6ZUT4 128 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms