RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	LINC00959	A0A1B0GUT2	108 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	SMIM27	A0A1W2PRY6	76 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	hDV102S1	A0JD36	115 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	LINC00862	A6NCI5	91 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	ZNF727	A8MUV8	499 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	VCY	O14598	125 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	PMCH	P20382	165 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	TMEM241	Q24JQ0	296 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	CLPSL2	Q6UWE3	100 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	ISOC2	Q96AB3	205 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	TIMM21	Q9BVV7	248 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	EIF5A2	Q9GZV4	153 aa	Known RBP	4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	ST20	Q9HBF5	79 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143	AP5S1	Q9NUS5	200 aa		4.59	□□□□□ -1.67
SPOCK3-223	ENST00000515143		A0A087WYN8	130 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143		A0A1B0GW15	77 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	GAGE12H	A6NDE8	117 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	GAS8-AS1	O95177	125 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	APCS	P02743	223 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	RPL37A	P61513	92 aa	Known RBP	4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	RIG	Q13278	110 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	CD164L2	Q6UWJ8	174 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	NRAC	Q8N912	160 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	NUP35	Q8NFH5	326 aa		4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.58	□□□□□ -1.68
SPOCK3-223	ENST00000515143		C9JQL5	133 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PPP1R2P9	O14990	202 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	TCAP	O15273	167 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	MT1HL1	P0DM35	61 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	HNRNPA3	P51991	378 aa	Known RBP	4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	RPL23	P62829	140 aa	Known RBP	4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	FAM104B	Q5XKR9	115 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	AMMECR1L	Q6DCA0	310 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	ZNF664	Q8N3J9	261 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	BORCS7	Q96B45	105 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	C20orf78	Q9BR46	151 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	LINC00474	Q9P2X8	69 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	NAT8B	Q9UHF3	227 aa		4.57	□□□□□ -1.68
SPOCK3-223	ENST00000515143	HMCN2	Q8NDA2	5059 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	IGHV1-58	A0A0C4DH39	117 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PRSS47	A8MTI9	375 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	C1orf196	B1AJZ1	125 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PHOX2A	O14813	284 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	SUMO2	P61956	95 aa	Known RBP	4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	SMAGP	Q0VAQ4	97 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	ANKRD39	Q53RE8	183 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	AMN1	Q8IY45	258 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	FAM104A	Q969W3	186 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	TMEM101	Q96IK0	257 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	BTF3L4	Q96K17	158 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	NAT8	Q9UHE5	227 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PKIG	Q9Y2B9	76 aa		4.56	□□□□□ -1.68
SPOCK3-223	ENST00000515143		A0A1B0GVG6	124 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143		A0A1B0GXF2	115 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	C7orf77	A4D0Y5	90 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143		F8WDY8	70 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	COX6A2	Q02221	97 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PEA15	Q15121	130 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	SS18	Q15532	418 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	RNASEK	Q6P5S7	137 aa	Known RBP	4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PRSS3P2	Q8NHM4	247 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	UBE2D4	Q9Y2X8	147 aa		4.55	□□□□□ -1.68
SPOCK3-223	ENST00000515143	hCG_2014768	A0A024R1R8	64 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	PPBP	P02775	128 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	MRPS36	P82909	103 aa	Known RBP	4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	SRSF3	P84103	164 aa	Known RBP	4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	RNF151	Q2KHN1	245 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	MRPL51	Q4U2R6	128 aa	Known RBP	4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	C2orf48	Q96LS8	159 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	KIR2DL4	Q99706	377 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	TMEM242	Q9NWH2	141 aa		4.54	□□□□□ -1.68
SPOCK3-223	ENST00000515143	S100A8	P05109	93 aa		4.53	□□□□□ -1.68
SPOCK3-223	ENST00000515143	CHTF8	P0CG12	524 aa		4.53	□□□□□ -1.68
SPOCK3-223	ENST00000515143	CEBPG	P53567	150 aa		4.53	□□□□□ -1.68
SPOCK3-223	ENST00000515143	ODF1	Q14990	250 aa		4.53	□□□□□ -1.68
SPOCK3-223	ENST00000515143		A0A096LNI7	61 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143		F8W036	122 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	TNFRSF6B	O95407	300 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	XCL1	P47992	114 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	KRTAP10-8	P60410	259 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	SYCN	Q0VAF6	134 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	HIGD2B	Q4VC39	106 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	ATP5L2	Q7Z4Y8	100 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	C7orf33	Q8WU49	177 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	TMEM18	Q96B42	140 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	DPH3	Q96FX2	82 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	LINC01600	Q96MT4	127 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	SPANXA1	Q9NS26	97 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	PYGO1	Q9Y3Y4	419 aa		4.52	□□□□□ -1.69
SPOCK3-223	ENST00000515143	IGLV4-69	A0A075B6H9	119 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	SMKR1	H3BMG3	65 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	COX7A2L	O14548	114 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	FCER1G	P30273	86 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	CKS2	P33552	79 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	PTTG1IP	P53801	180 aa		4.51	□□□□□ -1.69
SPOCK3-223	ENST00000515143	HBB	P68871	147 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms