RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 SMIM15Q7Z3B0 74 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 RPL39LQ96EH5 51 aaKnown RBP5.95□□□□□ -1.46
TCOF1-212ENST00000513538 EIF5A2Q9GZV4 153 aaKnown RBP5.95□□□□□ -1.46
TCOF1-212ENST00000513538 OSTCQ9NRP0 149 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 LPAP08519 4548 aa5.95□□□□□ -1.46
TCOF1-212ENST00000513538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.94□□□□□ -1.46
TCOF1-212ENST00000513538 TRBV6-5A0A0K0K1A5 114 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 IGKV2-29A2NJV5 120 aaPredicted RBP5.94□□□□□ -1.46
TCOF1-212ENST00000513538 FAM231BA6NCW3 169 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 ZNF727A8MUV8 499 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 C9JQL5 133 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 TSKUQ8WUA8 353 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 SMIM7Q9BQ49 75 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 V9GYV3 84 aa5.94□□□□□ -1.46
TCOF1-212ENST00000513538 NCR2O95944 276 aa5.93□□□□□ -1.46
TCOF1-212ENST00000513538 CEBPGP53567 150 aa5.93□□□□□ -1.46
TCOF1-212ENST00000513538 TEX261Q6UWH6 196 aa5.93□□□□□ -1.46
TCOF1-212ENST00000513538 ISOC2Q96AB3 205 aa5.93□□□□□ -1.46
TCOF1-212ENST00000513538 TMEM191AQ9H0A3 160 aa5.93□□□□□ -1.46
TCOF1-212ENST00000513538 SDHAF1A6NFY7 115 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 HIGD1CA8MV81 97 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 FGF6P10767 208 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 ESDP10768 282 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 RAB4AP20338 218 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 POLR2KP53803 58 aaKnown RBP5.92□□□□□ -1.46
TCOF1-212ENST00000513538 RPL23P62829 140 aaKnown RBP5.92□□□□□ -1.46
TCOF1-212ENST00000513538 SRSF3P84103 164 aaKnown RBP5.92□□□□□ -1.46
TCOF1-212ENST00000513538 RNASEKQ6P5S7 137 aaKnown RBP5.92□□□□□ -1.46
TCOF1-212ENST00000513538 Q6ZRP5 223 aa5.92□□□□□ -1.46
TCOF1-212ENST00000513538 A0A1B0GUT8 65 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 H7C423 109 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 XCL1P47992 114 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 TMEM241Q24JQ0 296 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 FAM74A3Q4VXF1 159 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 AMMECR1LQ6DCA0 310 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 BORCS7Q96B45 105 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 CARD19Q96LW7 228 aa5.91□□□□□ -1.46
TCOF1-212ENST00000513538 A0A1W2PNN7 141 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 I3L3M4 83 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 CCL25O15444 150 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 TSHBP01222 138 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 PTTG1IPP53801 180 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 NUP35Q8NFH5 326 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 SMDT1Q9H4I9 107 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.46
TCOF1-212ENST00000513538 IGHV1-58A0A0C4DH39 117 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 TRBV27A0A0K0K1C4 114 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 LINC00959A0A1B0GUT2 108 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 APCSP02743 223 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 SYCNQ0VAF6 134 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 AMN1Q8IY45 258 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 OR5A1Q8NGJ0 315 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 PSORS1C2Q9UIG4 136 aa5.89□□□□□ -1.47
TCOF1-212ENST00000513538 SMIM27A0A1W2PRY6 76 aa5.88□□□□□ -1.47
TCOF1-212ENST00000513538 NRACQ8N912 160 aa5.88□□□□□ -1.47
TCOF1-212ENST00000513538 MRAP2Q96G30 205 aa5.88□□□□□ -1.47
TCOF1-212ENST00000513538 ST20Q9HBF5 79 aa5.88□□□□□ -1.47
TCOF1-212ENST00000513538 NAT8BQ9UHF3 227 aa5.88□□□□□ -1.47
TCOF1-212ENST00000513538 ZNF25P17030 456 aaPredicted RBP5.87□□□□□ -1.47
TCOF1-212ENST00000513538 PMCHP20382 165 aa5.87□□□□□ -1.47
TCOF1-212ENST00000513538 GAGE2BQ13066 116 aa5.87□□□□□ -1.47
TCOF1-212ENST00000513538 RIGQ13278 110 aa5.87□□□□□ -1.47
TCOF1-212ENST00000513538 PEA15Q15121 130 aa5.87□□□□□ -1.47
TCOF1-212ENST00000513538 MRPL52Q86TS9 123 aaKnown RBP5.87□□□□□ -1.47
TCOF1-212ENST00000513538 TMEM242Q9NWH2 141 aa5.87□□□□□ -1.47
TCOF1-212ENST00000513538 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 SMKR1H3BMG3 65 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 CAMPP49913 170 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 ADIRFQ15847 76 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 FAM104BQ5XKR9 115 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 CD164L2Q6UWJ8 174 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 KRTAP11-1Q8IUC1 163 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 PRR26Q8N8Z3 221 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 CDC42SE2Q9NRR3 84 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 PKIGQ9Y2B9 76 aa5.86□□□□□ -1.47
TCOF1-212ENST00000513538 TRBV24-1A0A075B6N3 115 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 A0A1B0GXF2 115 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.85□□□□□ -1.47
TCOF1-212ENST00000513538 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 VCYO14598 125 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 PPP1R17O96001 155 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 MRPL51Q4U2R6 128 aaKnown RBP5.85□□□□□ -1.47
TCOF1-212ENST00000513538 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
TCOF1-212ENST00000513538 PHF5AQ7RTV0 110 aaKnown RBP5.85□□□□□ -1.47
TCOF1-212ENST00000513538 TMEM101Q96IK0 257 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 BTF3L4Q96K17 158 aa5.85□□□□□ -1.47
TCOF1-212ENST00000513538 A0A1B0GW15 77 aa5.84□□□□□ -1.47
TCOF1-212ENST00000513538 LINC00862A6NCI5 91 aa5.84□□□□□ -1.47
TCOF1-212ENST00000513538 MT-ND6P03923 174 aa5.84□□□□□ -1.47
TCOF1-212ENST00000513538 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
TCOF1-212ENST00000513538 RPL32P62910 135 aaKnown RBP5.84□□□□□ -1.47
TCOF1-212ENST00000513538 SS18Q15532 418 aa5.84□□□□□ -1.47
TCOF1-212ENST00000513538 C1orf137Q5JT78 98 aa5.84□□□□□ -1.47
TCOF1-212ENST00000513538 CSDC2Q9Y534 153 aaKnown RBP5.84□□□□□ -1.47
TCOF1-212ENST00000513538 C7orf77A4D0Y5 90 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 APOMO95445 188 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 SMAGPQ0VAQ4 97 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 RNASE13Q5GAN3 156 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms