RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 SS18Q15532 418 aa8.35□□□□□ -1.07
POLR2J3-217ENST00000513438 TMEM242Q9NWH2 141 aa8.35□□□□□ -1.07
POLR2J3-217ENST00000513438 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
POLR2J3-217ENST00000513438 CEBPGP53567 150 aa8.34□□□□□ -1.07
POLR2J3-217ENST00000513438 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-217ENST00000513438 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
POLR2J3-217ENST00000513438 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
POLR2J3-217ENST00000513438 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
POLR2J3-217ENST00000513438 ZNF561-AS1K7EIQ3 104 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 CT83Q5H943 113 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 SPINK6Q6UWN8 80 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 ZNF664Q8N3J9 261 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 BORCS7Q96B45 105 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
POLR2J3-217ENST00000513438 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 RAB4AP20338 218 aa8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 MRPL52Q86TS9 123 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 LRP2P98164 4655 aa8.32□□□□□ -1.08
POLR2J3-217ENST00000513438 TRBV27A0A0K0K1C4 114 aa8.31□□□□□ -1.08
POLR2J3-217ENST00000513438 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
POLR2J3-217ENST00000513438 SRSF9Q13242 221 aaKnown RBP eCLIP8.31□□□□□ -1.08
POLR2J3-217ENST00000513438 ALKAL2Q6UX46 152 aa8.31□□□□□ -1.08
POLR2J3-217ENST00000513438 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
POLR2J3-217ENST00000513438 C7orf77A4D0Y5 90 aa8.3□□□□□ -1.08
POLR2J3-217ENST00000513438 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
POLR2J3-217ENST00000513438 Q6ZRP5 223 aa8.3□□□□□ -1.08
POLR2J3-217ENST00000513438 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
POLR2J3-217ENST00000513438 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 VCYO14598 125 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 MALP21145 153 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 CAMPP49913 170 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 OSTCQ9NRP0 149 aa8.29□□□□□ -1.08
POLR2J3-217ENST00000513438 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 FCER1GP30273 86 aa8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 LINC01551Q86U37 167 aa8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 ISOC2Q96AB3 205 aa8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-217ENST00000513438 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
POLR2J3-217ENST00000513438 COX7A2LO14548 114 aa8.27□□□□□ -1.09
POLR2J3-217ENST00000513438 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-217ENST00000513438 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
POLR2J3-217ENST00000513438 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-217ENST00000513438 ZNF727A8MUV8 499 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 S100A1P23297 94 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 RIGQ13278 110 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
POLR2J3-217ENST00000513438 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 PPP1R17O96001 155 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 SRP19P09132 144 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 SMAGPQ0VAQ4 97 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 NRACQ8N912 160 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 V9GYV3 84 aa8.25□□□□□ -1.09
POLR2J3-217ENST00000513438 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
POLR2J3-217ENST00000513438 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
POLR2J3-217ENST00000513438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 APOMO95445 188 aa8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 NDUFA5Q16718 116 aa8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 MRPL51Q4U2R6 128 aaKnown RBP8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 Q6ZUT4 128 aa8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
POLR2J3-217ENST00000513438 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 TIMM21Q9BVV7 248 aa8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 NAT8BQ9UHF3 227 aa8.22□□□□□ -1.09
POLR2J3-217ENST00000513438 MT-ND6P03923 174 aa8.21□□□□□ -1.1
POLR2J3-217ENST00000513438 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
POLR2J3-217ENST00000513438 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
POLR2J3-217ENST00000513438 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 LINC00862A6NCI5 91 aa8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
POLR2J3-217ENST00000513438 CKS2P33552 79 aa8.19□□□□□ -1.1
POLR2J3-217ENST00000513438 RPL39P62891 51 aaKnown RBP8.19□□□□□ -1.1
POLR2J3-217ENST00000513438 FAM74A3Q4VXF1 159 aa8.19□□□□□ -1.1
POLR2J3-217ENST00000513438 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
POLR2J3-217ENST00000513438 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
POLR2J3-217ENST00000513438 TRBV24-1A0A075B6N3 115 aa8.18□□□□□ -1.1
POLR2J3-217ENST00000513438 SMIM27A0A1W2PRY6 76 aa8.18□□□□□ -1.1
POLR2J3-217ENST00000513438 TNFRSF6BO95407 300 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms