RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FGF7P21781 194 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 BAXQ07812 192 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 SMUG1Q53HV7 270 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 SPANXN2Q5MJ10 180 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 DNLZQ5SXM8 178 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 LINC00518Q8N0U6 118 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.19□□□□□ -1.9
USP53-206ENST00000510737 NUP35Q8NFH5 326 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 OR5C1Q8NGR4 320 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 MBD2Q9UBB5 411 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 PSG8Q9UQ74 426 aa3.19□□□□□ -1.9
USP53-206ENST00000510737 IGLV4-69A0A075B6H9 119 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 UBE2L5PA0A1B0GUS4 154 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 A4D1N5 150 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 KRBOX1C9JBD0 128 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 APOMO95445 188 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 CRIP1P50238 77 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 UBE2L3P68036 154 aaKnown RBP3.18□□□□□ -1.9
USP53-206ENST00000510737 NEDD8Q15843 81 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 FP248Q71RG6 208 aaPredicted RBP3.18□□□□□ -1.9
USP53-206ENST00000510737 C15orf40Q8WUR7 153 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 SMIM4Q8WVI0 70 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 NDFIP1Q9BT67 221 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 TMEM243Q9BU79 118 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 ZNF471Q9BX82 626 aaPredicted RBP3.18□□□□□ -1.9
USP53-206ENST00000510737 NPCDR1Q9BY65 106 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 MCUBQ9NWR8 336 aa3.18□□□□□ -1.9
USP53-206ENST00000510737 FABP5P3A8MUU1 101 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 B4DEV8 164 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 RPL12P30050 165 aaKnown RBP3.17□□□□□ -1.9
USP53-206ENST00000510737 XCL1P47992 114 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 NCS1P62166 190 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 CTAG1AP78358 180 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 RPL18AQ02543 176 aaKnown RBP3.17□□□□□ -1.9
USP53-206ENST00000510737 ZNF56Q15929 161 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 PRNTQ86SH4 94 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 C11orf1Q9H5F2 150 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 GSKIPQ9P0R6 139 aa3.17□□□□□ -1.9
USP53-206ENST00000510737 C9orf170A2RU37 121 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 M0R036 132 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 TCRAP04437 139 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 S100A11P31949 105 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 BCAP31P51572 246 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 MRPS10P82664 201 aaKnown RBP3.16□□□□□ -1.9
USP53-206ENST00000510737 IAH1Q2TAA2 248 aaPredicted RBP3.16□□□□□ -1.9
USP53-206ENST00000510737 FAM74A1Q5RGS3 127 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 FAM19A5Q7Z5A7 132 aaPredicted RBP3.16□□□□□ -1.9
USP53-206ENST00000510737 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
USP53-206ENST00000510737 IGSF23A1L1A6 192 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 L7N2F9 121 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 CCL25O15444 150 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 TPT1P13693 172 aaKnown RBP3.15□□□□□ -1.91
USP53-206ENST00000510737 VBP1P61758 197 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 UBE2BP63146 152 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 FLI1Q01543 452 aaPredicted RBP3.15□□□□□ -1.91
USP53-206ENST00000510737 SAPCD1Q5SSQ6 148 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 ZFP82Q8N141 532 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 TMEM252Q8N6L7 170 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 ISOC2Q96AB3 205 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 FLVCR2Q9UPI3 526 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 KMT2DO14686 5537 aa3.15□□□□□ -1.91
USP53-206ENST00000510737 TMSB15BA0A087X1C1 80 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 LINC00959A0A1B0GUT2 108 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 M0QY20 66 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 UBE2L6O14933 153 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 SULT1A1P50225 295 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 ATP6V1FQ16864 119 aa3.14□□□□□ -1.91
USP53-206ENST00000510737 RSL24D1Q9UHA3 163 aaKnown RBP3.14□□□□□ -1.91
USP53-206ENST00000510737 SERTM2A0A1B0GWG4 89 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 C19orf71A6NCJ1 209 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 M0QXV9 152 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 ESDP10768 282 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
USP53-206ENST00000510737 TMBIM6P55061 237 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 OR10AG1Q8NH19 301 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 MCFD2Q8NI22 146 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 MED28Q9H204 178 aa3.13□□□□□ -1.91
USP53-206ENST00000510737 LSM5Q9Y4Y9 91 aaKnown RBP3.13□□□□□ -1.91
USP53-206ENST00000510737 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 A0A1B0GVG6 124 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 H3BMQ9 156 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 SH2D1AO60880 128 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 DEFA3P59666 94 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 SSTP61278 116 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 IL18Q14116 193 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 FAM229BQ4G0N7 80 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 KHDC3LQ587J8 217 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 CD164L2Q6UWJ8 174 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 PGLYRP4Q96LB8 373 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 SLC25A21Q9BQT8 299 aaPredicted RBP3.12□□□□□ -1.91
USP53-206ENST00000510737 EPDR1Q9UM22 224 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 ARL2-SNX15V9GYD0 113 aa3.12□□□□□ -1.91
USP53-206ENST00000510737 IGKV2D-26A0A0A0MRZ7 120 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 K7EQM0 130 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 NUPR1O60356 82 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 TLX1NBP0CAT3 122 aa3.11□□□□□ -1.91
USP53-206ENST00000510737 TAS2R45P59539 299 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms