RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PHOX2AO14813 284 aa6.45□□□□□ -1.38
SCARB2-204ENST00000509994 CCL25O15444 150 aa6.45□□□□□ -1.38
SCARB2-204ENST00000509994 NDUFS6O75380 124 aaKnown RBP6.45□□□□□ -1.38
SCARB2-204ENST00000509994 FCER1GP30273 86 aa6.45□□□□□ -1.38
SCARB2-204ENST00000509994 SS18Q15532 418 aa6.45□□□□□ -1.38
SCARB2-204ENST00000509994 FAM231DQ6ZW35 169 aa6.45□□□□□ -1.38
SCARB2-204ENST00000509994 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
SCARB2-204ENST00000509994 CIRBPQ14011 172 aaKnown RBP6.44□□□□□ -1.38
SCARB2-204ENST00000509994 CT83Q5H943 113 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 Q6ZRU5 148 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 STPG4Q8N801 248 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 PRSS3P2Q8NHM4 247 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 TSKUQ8WUA8 353 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 PKIGQ9Y2B9 76 aa6.44□□□□□ -1.38
SCARB2-204ENST00000509994 GVQW2A0A096LPI5 108 aaPredicted RBP6.43□□□□□ -1.38
SCARB2-204ENST00000509994 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 C7orf77A4D0Y5 90 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 ZNF561-AS1K7EIQ3 104 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 TSHBP01222 138 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 MALP21145 153 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 FOXI1Q12951 378 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 RIGQ13278 110 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 LINC01551Q86U37 167 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 AMN1Q8IY45 258 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 PLAC8Q9NZF1 115 aa6.43□□□□□ -1.38
SCARB2-204ENST00000509994 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 SMKR1H3BMG3 65 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 SMAGPQ0VAQ4 97 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 TMEM191AQ9H0A3 160 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 LINC00474Q9P2X8 69 aa6.42□□□□□ -1.38
SCARB2-204ENST00000509994 A0A096LNI7 61 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 FAM231BA6NCW3 169 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 RAB4AP20338 218 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 ADIRFQ15847 76 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 ZNF664Q8N3J9 261 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 FAM210AQ96ND0 272 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 KIR2DL4Q99706 377 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 OSTCQ9NRP0 149 aa6.41□□□□□ -1.38
SCARB2-204ENST00000509994 VCYO14598 125 aa6.4□□□□□ -1.38
SCARB2-204ENST00000509994 PPP1R17O96001 155 aa6.4□□□□□ -1.38
SCARB2-204ENST00000509994 SYCNQ0VAF6 134 aa6.4□□□□□ -1.38
SCARB2-204ENST00000509994 RNASE13Q5GAN3 156 aaKnown RBP6.4□□□□□ -1.38
SCARB2-204ENST00000509994 ISOC2Q96AB3 205 aa6.4□□□□□ -1.38
SCARB2-204ENST00000509994 TRAV13-1A0A0B4J241 112 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 TRBV27A0A0K0K1C4 114 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 COX7A2LO14548 114 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 SRP19P09132 144 aaKnown RBP6.39□□□□□ -1.39
SCARB2-204ENST00000509994 ESDP10768 282 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 CAMPP49913 170 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 PRR3P79522 188 aaKnown RBP6.39□□□□□ -1.39
SCARB2-204ENST00000509994 GAGE2BQ13066 116 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 TMEM241Q24JQ0 296 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 MRPL52Q86TS9 123 aaKnown RBP6.39□□□□□ -1.39
SCARB2-204ENST00000509994 NUP35Q8NFH5 326 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 TMEM18Q96B42 140 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 CDC42SE2Q9NRR3 84 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
SCARB2-204ENST00000509994 C1orf196B1AJZ1 125 aa6.38□□□□□ -1.39
SCARB2-204ENST00000509994 PPP1R2P9O14990 202 aa6.38□□□□□ -1.39
SCARB2-204ENST00000509994 POLR2KP53803 58 aaKnown RBP6.38□□□□□ -1.39
SCARB2-204ENST00000509994 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
SCARB2-204ENST00000509994 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
SCARB2-204ENST00000509994 V9GYV3 84 aa6.38□□□□□ -1.39
SCARB2-204ENST00000509994 IGLV4-69A0A075B6H9 119 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 LOC100996750A0A140TA64 210 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 CKS2P33552 79 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 RPL18AQ02543 176 aaKnown RBP6.37□□□□□ -1.39
SCARB2-204ENST00000509994 FAM74A3Q4VXF1 159 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 KRTAP4-6Q9BYQ5 205 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
SCARB2-204ENST00000509994 APOMO95445 188 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 RPL23P62829 140 aaKnown RBP6.36□□□□□ -1.39
SCARB2-204ENST00000509994 REG3GQ6UW15 175 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 Q6ZUT4 128 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 NAT8Q9UHE5 227 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
SCARB2-204ENST00000509994 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
SCARB2-204ENST00000509994 PEA15Q15121 130 aa6.35□□□□□ -1.39
SCARB2-204ENST00000509994 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
SCARB2-204ENST00000509994 MRPL54Q6P161 138 aaKnown RBP6.35□□□□□ -1.39
SCARB2-204ENST00000509994 Q6ZRP5 223 aa6.35□□□□□ -1.39
SCARB2-204ENST00000509994 NRACQ8N912 160 aa6.35□□□□□ -1.39
SCARB2-204ENST00000509994 F8W036 122 aa6.34□□□□□ -1.39
SCARB2-204ENST00000509994 TCAPO15273 167 aa6.34□□□□□ -1.39
SCARB2-204ENST00000509994 S100A8P05109 93 aa6.34□□□□□ -1.39
SCARB2-204ENST00000509994 SPAG11BQ08648 103 aa6.34□□□□□ -1.39
SCARB2-204ENST00000509994 FAM104BQ5XKR9 115 aa6.34□□□□□ -1.39
SCARB2-204ENST00000509994 A0A1B0GW15 77 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 SMIM27A0A1W2PRY6 76 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 D6R8Y8 96 aa6.33□□□□□ -1.4
SCARB2-204ENST00000509994 MT-ND6P03923 174 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms