RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
SMN1-204ENST00000506163 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
SMN1-204ENST00000506163 ZNF25P17030 456 aaPredicted RBP11.62□□□□□ -0.55
SMN1-204ENST00000506163 ORMDL3Q8N138 153 aa11.62□□□□□ -0.55
SMN1-204ENST00000506163 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
SMN1-204ENST00000506163 PHOX2AO14813 284 aa11.61□□□□□ -0.55
SMN1-204ENST00000506163 HAMPP81172 84 aa11.61□□□□□ -0.55
SMN1-204ENST00000506163 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
SMN1-204ENST00000506163 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
SMN1-204ENST00000506163 TCAPO15273 167 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 ABCA13Q86UQ4 5058 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 CHCHD10Q8WYQ3 142 aaPredicted RBP11.6□□□□□ -0.55
SMN1-204ENST00000506163 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
SMN1-204ENST00000506163 RPL39P62891 51 aaKnown RBP11.59□□□□□ -0.55
SMN1-204ENST00000506163 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
SMN1-204ENST00000506163 TMEM101Q96IK0 257 aa11.59□□□□□ -0.55
SMN1-204ENST00000506163 LINC00959A0A1B0GUT2 108 aa11.58□□□□□ -0.56
SMN1-204ENST00000506163 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
SMN1-204ENST00000506163 C14orf177Q52M58 125 aa11.58□□□□□ -0.56
SMN1-204ENST00000506163 Q8N1X5 172 aa11.58□□□□□ -0.56
SMN1-204ENST00000506163 CSDC2Q9Y534 153 aaKnown RBP11.58□□□□□ -0.56
SMN1-204ENST00000506163 FAT1Q14517 4588 aa11.58□□□□□ -0.56
SMN1-204ENST00000506163 FOXI1Q12951 378 aa11.57□□□□□ -0.56
SMN1-204ENST00000506163 RNASE13Q5GAN3 156 aaKnown RBP11.57□□□□□ -0.56
SMN1-204ENST00000506163 Q6ZSA8 131 aa11.57□□□□□ -0.56
SMN1-204ENST00000506163 LOC389332A0A1B0GUA5 103 aa11.56□□□□□ -0.56
SMN1-204ENST00000506163 SLPIP03973 132 aa11.56□□□□□ -0.56
SMN1-204ENST00000506163 KIAA1644Q3SXP7 199 aa11.56□□□□□ -0.56
SMN1-204ENST00000506163 C15orf56Q8N910 161 aa11.56□□□□□ -0.56
SMN1-204ENST00000506163 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
SMN1-204ENST00000506163 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
SMN1-204ENST00000506163 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
SMN1-204ENST00000506163 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
SMN1-204ENST00000506163 LAMTOR2Q9Y2Q5 125 aa11.55□□□□□ -0.56
SMN1-204ENST00000506163 CCL25O15444 150 aa11.54□□□□□ -0.56
SMN1-204ENST00000506163 XCL1P47992 114 aa11.54□□□□□ -0.56
SMN1-204ENST00000506163 RHEBQ15382 184 aa11.54□□□□□ -0.56
SMN1-204ENST00000506163 DGAT2L7PQ6IED9 249 aa11.54□□□□□ -0.56
SMN1-204ENST00000506163 Q6ZUT4 128 aa11.54□□□□□ -0.56
SMN1-204ENST00000506163 hDV102S1A0JD36 115 aa11.52□□□□□ -0.56
SMN1-204ENST00000506163 APOC3P02656 99 aa11.52□□□□□ -0.56
SMN1-204ENST00000506163 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.56
SMN1-204ENST00000506163 MAP1LC3AQ9H492 121 aa11.52□□□□□ -0.56
SMN1-204ENST00000506163 VPS13BQ7Z7G8 4022 aa11.52□□□□□ -0.57
SMN1-204ENST00000506163 S100PP25815 95 aa11.52□□□□□ -0.57
SMN1-204ENST00000506163 Q8N8P6 123 aa11.52□□□□□ -0.57
SMN1-204ENST00000506163 TMEM18Q96B42 140 aa11.52□□□□□ -0.57
SMN1-204ENST00000506163 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
SMN1-204ENST00000506163 RAB5AP20339 215 aa11.51□□□□□ -0.57
SMN1-204ENST00000506163 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
SMN1-204ENST00000506163 GNB1LQ9BYB4 327 aa11.51□□□□□ -0.57
SMN1-204ENST00000506163 TRAV13-1A0A0B4J241 112 aa11.5□□□□□ -0.57
SMN1-204ENST00000506163 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
SMN1-204ENST00000506163 SS18Q15532 418 aa11.5□□□□□ -0.57
SMN1-204ENST00000506163 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
SMN1-204ENST00000506163 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
SMN1-204ENST00000506163 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
SMN1-204ENST00000506163 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
SMN1-204ENST00000506163 SDIM1Q6ZPB5 146 aa11.49□□□□□ -0.57
SMN1-204ENST00000506163 TGIF2-C20orf24A0A0A6YYL0 155 aa11.48□□□□□ -0.57
SMN1-204ENST00000506163 MRPS36P82909 103 aaKnown RBP11.48□□□□□ -0.57
SMN1-204ENST00000506163 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
SMN1-204ENST00000506163 C1orf196B1AJZ1 125 aa11.47□□□□□ -0.57
SMN1-204ENST00000506163 PANO1I0J062 215 aa11.47□□□□□ -0.57
SMN1-204ENST00000506163 CFAP161Q6P656 301 aa11.47□□□□□ -0.57
SMN1-204ENST00000506163 ALKBH7Q9BT30 221 aaPredicted RBP11.47□□□□□ -0.57
SMN1-204ENST00000506163 GVQW2A0A096LPI5 108 aaPredicted RBP11.46□□□□□ -0.57
SMN1-204ENST00000506163 SCXQ7RTU7 201 aa11.46□□□□□ -0.57
SMN1-204ENST00000506163 SVBPQ8N300 66 aa11.46□□□□□ -0.57
SMN1-204ENST00000506163 LINC00526Q96FQ7 95 aa11.46□□□□□ -0.57
SMN1-204ENST00000506163 PYGO1Q9Y3Y4 419 aa11.46□□□□□ -0.57
SMN1-204ENST00000506163 SNAPINO95295 136 aa11.45□□□□□ -0.58
SMN1-204ENST00000506163 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
SMN1-204ENST00000506163 MRPL18Q9H0U6 180 aaKnown RBP11.45□□□□□ -0.58
SMN1-204ENST00000506163 IGLV4-3A0A075B6K6 122 aa11.44□□□□□ -0.58
SMN1-204ENST00000506163 C2orf66Q6UXQ4 117 aa11.44□□□□□ -0.58
SMN1-204ENST00000506163 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
SMN1-204ENST00000506163 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
SMN1-204ENST00000506163 AP5S1Q9NUS5 200 aa11.44□□□□□ -0.58
SMN1-204ENST00000506163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.44□□□□□ -0.58
SMN1-204ENST00000506163 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 FABP9Q0Z7S8 132 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 COX19Q49B96 90 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 Q5VSD8 79 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 IGHV1-58A0A0C4DH39 117 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 NDUFA5Q16718 116 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 ORMDL2Q53FV1 153 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 CYSLTR1Q9Y271 337 aa11.43□□□□□ -0.58
SMN1-204ENST00000506163 IGIPA6NJ69 53 aa11.42□□□□□ -0.58
SMN1-204ENST00000506163 LINC01546A6NGU7 62 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 IFITM10A6NMD0 228 aa11.41□□□□□ -0.58
SMN1-204ENST00000506163 K7EMI3 77 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms