RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CT83Q5H943 113 aa10.1□□□□□ -0.79
PDLIM7-213ENST00000505074 STPG4Q8N801 248 aa10.1□□□□□ -0.79
PDLIM7-213ENST00000505074 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
PDLIM7-213ENST00000505074 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
PDLIM7-213ENST00000505074 HIGD1CA8MV81 97 aa10.09□□□□□ -0.79
PDLIM7-213ENST00000505074 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
PDLIM7-213ENST00000505074 LINC00959A0A1B0GUT2 108 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 ZNF727A8MUV8 499 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 TSHBP01222 138 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 SS18Q15532 418 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
PDLIM7-213ENST00000505074 A0A096LNI7 61 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 FCER1GP30273 86 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 LINC01551Q86U37 167 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 AMN1Q8IY45 258 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 TMEM191AQ9H0A3 160 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 PKIGQ9Y2B9 76 aa10.07□□□□□ -0.8
PDLIM7-213ENST00000505074 C7orf77A4D0Y5 90 aa10.06□□□□□ -0.8
PDLIM7-213ENST00000505074 ESDP10768 282 aa10.06□□□□□ -0.8
PDLIM7-213ENST00000505074 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
PDLIM7-213ENST00000505074 SMKR1H3BMG3 65 aa10.05□□□□□ -0.8
PDLIM7-213ENST00000505074 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
PDLIM7-213ENST00000505074 RAB4AP20338 218 aa10.05□□□□□ -0.8
PDLIM7-213ENST00000505074 OSTCQ9NRP0 149 aa10.05□□□□□ -0.8
PDLIM7-213ENST00000505074 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 RIGQ13278 110 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 ZNF664Q8N3J9 261 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 FAM210AQ96ND0 272 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 LINC00474Q9P2X8 69 aa10.04□□□□□ -0.8
PDLIM7-213ENST00000505074 TRBV27A0A0K0K1C4 114 aa10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 MALP21145 153 aa10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 POLR2KP53803 58 aaKnown RBP10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
PDLIM7-213ENST00000505074 VCYO14598 125 aa10.02□□□□□ -0.81
PDLIM7-213ENST00000505074 SRP19P09132 144 aaKnown RBP10.02□□□□□ -0.81
PDLIM7-213ENST00000505074 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
PDLIM7-213ENST00000505074 SYCNQ0VAF6 134 aa10.02□□□□□ -0.81
PDLIM7-213ENST00000505074 SMAGPQ0VAQ4 97 aa10.02□□□□□ -0.81
PDLIM7-213ENST00000505074 PPP1R17O96001 155 aa10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 CAMPP49913 170 aa10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 RNASE13Q5GAN3 156 aaKnown RBP10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 V9GYV3 84 aa10.01□□□□□ -0.81
PDLIM7-213ENST00000505074 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
PDLIM7-213ENST00000505074 ADIRFQ15847 76 aa10□□□□□ -0.81
PDLIM7-213ENST00000505074 ISOC2Q96AB3 205 aa10□□□□□ -0.81
PDLIM7-213ENST00000505074 NAT8BQ9UHF3 227 aa10□□□□□ -0.81
PDLIM7-213ENST00000505074 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 KRTAP9-6A0A140TA67 174 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 COX7A2LO14548 114 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 TMEM241Q24JQ0 296 aa9.99□□□□□ -0.81
PDLIM7-213ENST00000505074 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
PDLIM7-213ENST00000505074 PPP1R2P9O14990 202 aa9.98□□□□□ -0.81
PDLIM7-213ENST00000505074 REG3GQ6UW15 175 aa9.98□□□□□ -0.81
PDLIM7-213ENST00000505074 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
PDLIM7-213ENST00000505074 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
PDLIM7-213ENST00000505074 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
PDLIM7-213ENST00000505074 NRACQ8N912 160 aa9.97□□□□□ -0.81
PDLIM7-213ENST00000505074 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
PDLIM7-213ENST00000505074 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
PDLIM7-213ENST00000505074 PTTG1IPP53801 180 aa9.96□□□□□ -0.82
PDLIM7-213ENST00000505074 MRPL51Q4U2R6 128 aaKnown RBP9.96□□□□□ -0.82
PDLIM7-213ENST00000505074 FAM74A3Q4VXF1 159 aa9.96□□□□□ -0.82
PDLIM7-213ENST00000505074 Q6ZUT4 128 aa9.96□□□□□ -0.82
PDLIM7-213ENST00000505074 APOMO95445 188 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 CKS2P33552 79 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 FAM104BQ5XKR9 115 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 Q6ZRP5 223 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 NAT8Q9UHE5 227 aa9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 CSDC2Q9Y534 153 aaKnown RBP9.95□□□□□ -0.82
PDLIM7-213ENST00000505074 LPAP08519 4548 aa9.94□□□□□ -0.82
PDLIM7-213ENST00000505074 SPINK6Q6UWN8 80 aa9.94□□□□□ -0.82
PDLIM7-213ENST00000505074 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
PDLIM7-213ENST00000505074 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
PDLIM7-213ENST00000505074 SMIM27A0A1W2PRY6 76 aa9.92□□□□□ -0.82
PDLIM7-213ENST00000505074 MRPL54Q6P161 138 aaKnown RBP9.92□□□□□ -0.82
PDLIM7-213ENST00000505074 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
PDLIM7-213ENST00000505074 A0A1B0GW15 77 aa9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 LINC00862A6NCI5 91 aa9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 TCAPO15273 167 aa9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 RPL39P62891 51 aaKnown RBP9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 PEA15Q15121 130 aa9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 TIMM21Q9BVV7 248 aa9.91□□□□□ -0.82
PDLIM7-213ENST00000505074 C9JQL5 133 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 D6R8Y8 96 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 F8W036 122 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 TNFRSF6BO95407 300 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 S100A8P05109 93 aa9.9□□□□□ -0.82
PDLIM7-213ENST00000505074 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms