RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 SMIM15Q7Z3B0 74 aa8.72□□□□□ -1.01
POLR2J3-207ENST00000503564 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
POLR2J3-207ENST00000503564 TMEM242Q9NWH2 141 aa8.72□□□□□ -1.01
POLR2J3-207ENST00000503564 PMCHP20382 165 aa8.71□□□□□ -1.02
POLR2J3-207ENST00000503564 TAGLN2P37802 199 aaKnown RBP8.71□□□□□ -1.02
POLR2J3-207ENST00000503564 MRPL52Q86TS9 123 aaKnown RBP8.71□□□□□ -1.02
POLR2J3-207ENST00000503564 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
POLR2J3-207ENST00000503564 CDC42SE2Q9NRR3 84 aa8.71□□□□□ -1.02
POLR2J3-207ENST00000503564 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
POLR2J3-207ENST00000503564 CAMPP49913 170 aa8.7□□□□□ -1.02
POLR2J3-207ENST00000503564 SS18Q15532 418 aa8.7□□□□□ -1.02
POLR2J3-207ENST00000503564 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
POLR2J3-207ENST00000503564 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-207ENST00000503564 POLR2KP53803 58 aaKnown RBP8.69□□□□□ -1.02
POLR2J3-207ENST00000503564 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
POLR2J3-207ENST00000503564 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 LOC107984640A0A0U1RRK4 108 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 CT83Q5H943 113 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
POLR2J3-207ENST00000503564 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
POLR2J3-207ENST00000503564 A8MWL6 223 aa8.67□□□□□ -1.02
POLR2J3-207ENST00000503564 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
POLR2J3-207ENST00000503564 ISOC2Q96AB3 205 aa8.67□□□□□ -1.02
POLR2J3-207ENST00000503564 TMEM250H0YL14 139 aa8.66□□□□□ -1.02
POLR2J3-207ENST00000503564 SLC51BQ86UW2 128 aa8.66□□□□□ -1.02
POLR2J3-207ENST00000503564 TMEM191AQ9H0A3 160 aa8.66□□□□□ -1.02
POLR2J3-207ENST00000503564 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
POLR2J3-207ENST00000503564 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.65□□□□□ -1.02
POLR2J3-207ENST00000503564 APOMO95445 188 aa8.65□□□□□ -1.02
POLR2J3-207ENST00000503564 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 COX7A2LO14548 114 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 RAB4AP20338 218 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 TCTE3Q8IZS6 198 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 UBE2D4Q9Y2X8 147 aa8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 CSDC2Q9Y534 153 aaKnown RBP8.64□□□□□ -1.03
POLR2J3-207ENST00000503564 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 MALP21145 153 aa8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 RNASE13Q5GAN3 156 aaKnown RBP8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 AMN1Q8IY45 258 aa8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 C2orf48Q96LS8 159 aa8.63□□□□□ -1.03
POLR2J3-207ENST00000503564 LPAP08519 4548 aa8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 SMKR1H3BMG3 65 aa8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 MT-ND6P03923 174 aa8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 NRACQ8N912 160 aa8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
POLR2J3-207ENST00000503564 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
POLR2J3-207ENST00000503564 C1orf137Q5JT78 98 aa8.61□□□□□ -1.03
POLR2J3-207ENST00000503564 Q6ZUT4 128 aa8.61□□□□□ -1.03
POLR2J3-207ENST00000503564 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 VCYO14598 125 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 FCER1GP30273 86 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 SUMO2P61956 95 aaKnown RBP8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 LINC01551Q86U37 167 aa8.6□□□□□ -1.03
POLR2J3-207ENST00000503564 CEBPGP53567 150 aa8.59□□□□□ -1.03
POLR2J3-207ENST00000503564 RNF151Q2KHN1 245 aa8.59□□□□□ -1.03
POLR2J3-207ENST00000503564 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.03
POLR2J3-207ENST00000503564 OSTCQ9NRP0 149 aa8.59□□□□□ -1.03
POLR2J3-207ENST00000503564 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
POLR2J3-207ENST00000503564 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
POLR2J3-207ENST00000503564 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
POLR2J3-207ENST00000503564 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
POLR2J3-207ENST00000503564 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
POLR2J3-207ENST00000503564 PPP1R17O96001 155 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 BLOC1S1P78537 153 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 ALKAL2Q6UX46 152 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 KRTAP11-1Q8IUC1 163 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 OR10D4PQ8NGN7 298 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 FAM104AQ969W3 186 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 KIR2DL4Q99706 377 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 V9GYV3 84 aa8.57□□□□□ -1.04
POLR2J3-207ENST00000503564 RIGQ13278 110 aa8.56□□□□□ -1.04
POLR2J3-207ENST00000503564 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
POLR2J3-207ENST00000503564 FAM168BA1KXE4 195 aa8.55□□□□□ -1.04
POLR2J3-207ENST00000503564 H0Y9J4 135 aa8.55□□□□□ -1.04
POLR2J3-207ENST00000503564 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
POLR2J3-207ENST00000503564 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
POLR2J3-207ENST00000503564 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
POLR2J3-207ENST00000503564 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 ZNF727A8MUV8 499 aa8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 F8WDY8 70 aa8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
POLR2J3-207ENST00000503564 NDUFA1O15239 70 aa8.53□□□□□ -1.04
POLR2J3-207ENST00000503564 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
POLR2J3-207ENST00000503564 KRTAP1-4P0C5Y4 121 aa8.53□□□□□ -1.04
POLR2J3-207ENST00000503564 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
POLR2J3-207ENST00000503564 FAM104BQ5XKR9 115 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms