RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 SPACA4Q8TDM5 124 aa12.38□□□□□ -0.43
UBE2D3-215ENST00000503418 A0A087WYN8 130 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 CCL25O15444 150 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 RPL23P62829 140 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 COX6A2Q02221 97 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 ADIRFQ15847 76 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 FAM74A3Q4VXF1 159 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 FAT3Q8TDW7 4589 aa12.37□□□□□ -0.43
UBE2D3-215ENST00000503418 GVQW2A0A096LPI5 108 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-215ENST00000503418 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
UBE2D3-215ENST00000503418 LINC00959A0A1B0GUT2 108 aa12.36□□□□□ -0.43
UBE2D3-215ENST00000503418 C7orf77A4D0Y5 90 aa12.36□□□□□ -0.43
UBE2D3-215ENST00000503418 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
UBE2D3-215ENST00000503418 IGKV2-24A0A0C4DH68 120 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 C9JQL5 133 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 FCER1GP30273 86 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 SS18Q15532 418 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 NAT8Q9UHE5 227 aa12.34□□□□□ -0.43
UBE2D3-215ENST00000503418 VCYO14598 125 aa12.33□□□□□ -0.44
UBE2D3-215ENST00000503418 MAJINQ3KP22 176 aa12.33□□□□□ -0.44
UBE2D3-215ENST00000503418 ZNF664Q8N3J9 261 aa12.33□□□□□ -0.44
UBE2D3-215ENST00000503418 PRSS3P2Q8NHM4 247 aa12.33□□□□□ -0.44
UBE2D3-215ENST00000503418 PPP1R17O96001 155 aa12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 SRSF3P84103 164 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 PEA15Q15121 130 aa12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 NRACQ8N912 160 aa12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
UBE2D3-215ENST00000503418 IGHV1-58A0A0C4DH39 117 aa12.31□□□□□ -0.44
UBE2D3-215ENST00000503418 CAMPP49913 170 aa12.31□□□□□ -0.44
UBE2D3-215ENST00000503418 MRPL51Q4U2R6 128 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-215ENST00000503418 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
UBE2D3-215ENST00000503418 PLAC8Q9NZF1 115 aa12.31□□□□□ -0.44
UBE2D3-215ENST00000503418 SMIM27A0A1W2PRY6 76 aa12.3□□□□□ -0.44
UBE2D3-215ENST00000503418 FAM104BQ5XKR9 115 aa12.3□□□□□ -0.44
UBE2D3-215ENST00000503418 CD164L2Q6UWJ8 174 aa12.3□□□□□ -0.44
UBE2D3-215ENST00000503418 PHOX2AO14813 284 aa12.29□□□□□ -0.44
UBE2D3-215ENST00000503418 PPP1R2P9O14990 202 aa12.29□□□□□ -0.44
UBE2D3-215ENST00000503418 SERTAD4-AS1Q5TG53 156 aa12.29□□□□□ -0.44
UBE2D3-215ENST00000503418 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
UBE2D3-215ENST00000503418 A0A096LNI7 61 aa12.28□□□□□ -0.44
UBE2D3-215ENST00000503418 SMAGPQ0VAQ4 97 aa12.28□□□□□ -0.44
UBE2D3-215ENST00000503418 RNASE13Q5GAN3 156 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-215ENST00000503418 STPG4Q8N801 248 aa12.28□□□□□ -0.44
UBE2D3-215ENST00000503418 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
UBE2D3-215ENST00000503418 ZNF561-AS1K7EIQ3 104 aa12.27□□□□□ -0.45
UBE2D3-215ENST00000503418 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.45
UBE2D3-215ENST00000503418 A0A1B0GW15 77 aa12.26□□□□□ -0.45
UBE2D3-215ENST00000503418 CKS2P33552 79 aa12.26□□□□□ -0.45
UBE2D3-215ENST00000503418 MRPL54Q6P161 138 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-215ENST00000503418 SMDT1Q9H4I9 107 aa12.26□□□□□ -0.45
UBE2D3-215ENST00000503418 CSDC2Q9Y534 153 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-215ENST00000503418 LINC00862A6NCI5 91 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 C1orf196B1AJZ1 125 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 MALP21145 153 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 Q6ZRU5 148 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 TMEM18Q96B42 140 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
UBE2D3-215ENST00000503418 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
UBE2D3-215ENST00000503418 SYCNQ0VAF6 134 aa12.24□□□□□ -0.45
UBE2D3-215ENST00000503418 Q6ZUT4 128 aa12.24□□□□□ -0.45
UBE2D3-215ENST00000503418 C20orf78Q9BR46 151 aa12.24□□□□□ -0.45
UBE2D3-215ENST00000503418 COX7A2LO14548 114 aa12.23□□□□□ -0.45
UBE2D3-215ENST00000503418 HBBP68871 147 aa12.23□□□□□ -0.45
UBE2D3-215ENST00000503418 LINC00474Q9P2X8 69 aa12.23□□□□□ -0.45
UBE2D3-215ENST00000503418 D6R8Y8 96 aa12.22□□□□□ -0.45
UBE2D3-215ENST00000503418 F8W036 122 aa12.22□□□□□ -0.45
UBE2D3-215ENST00000503418 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
UBE2D3-215ENST00000503418 S100A8P05109 93 aa12.22□□□□□ -0.45
UBE2D3-215ENST00000503418 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.45
UBE2D3-215ENST00000503418 TRBV24-1A0A075B6N3 115 aa12.21□□□□□ -0.45
UBE2D3-215ENST00000503418 TIMM21Q9BVV7 248 aa12.21□□□□□ -0.45
UBE2D3-215ENST00000503418 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.45
UBE2D3-215ENST00000503418 TCAPO15273 167 aa12.2□□□□□ -0.46
UBE2D3-215ENST00000503418 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-215ENST00000503418 RPL32P62910 135 aaKnown RBP12.2□□□□□ -0.46
UBE2D3-215ENST00000503418 C5orf38Q86SI9 138 aa12.2□□□□□ -0.46
UBE2D3-215ENST00000503418 A0A1B0GXF2 115 aa12.19□□□□□ -0.46
UBE2D3-215ENST00000503418 NPYP01303 97 aa12.19□□□□□ -0.46
UBE2D3-215ENST00000503418 PRR3P79522 188 aaKnown RBP12.18□□□□□ -0.46
UBE2D3-215ENST00000503418 CAMK2N2Q96S95 79 aa12.18□□□□□ -0.46
UBE2D3-215ENST00000503418 PLA2G2DQ9UNK4 145 aa12.18□□□□□ -0.46
UBE2D3-215ENST00000503418 LOC107984640A0A0U1RRK4 108 aa12.17□□□□□ -0.46
UBE2D3-215ENST00000503418 MT1HL1P0DM35 61 aa12.17□□□□□ -0.46
UBE2D3-215ENST00000503418 RAB14P61106 215 aa12.17□□□□□ -0.46
UBE2D3-215ENST00000503418 GAGE2BQ13066 116 aa12.17□□□□□ -0.46
UBE2D3-215ENST00000503418 APOMO95445 188 aa12.16□□□□□ -0.46
UBE2D3-215ENST00000503418 PPBPP02775 128 aa12.16□□□□□ -0.46
UBE2D3-215ENST00000503418 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
UBE2D3-215ENST00000503418 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
UBE2D3-215ENST00000503418 IFITM2Q01629 132 aa12.15□□□□□ -0.46
UBE2D3-215ENST00000503418 OPRPNQ99935 248 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-215ENST00000503418 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
UBE2D3-215ENST00000503418 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
UBE2D3-215ENST00000503418 ATP5L2Q7Z4Y8 100 aa12.14□□□□□ -0.47
UBE2D3-215ENST00000503418 ORMDL3Q8N138 153 aa12.14□□□□□ -0.47
UBE2D3-215ENST00000503418 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
UBE2D3-215ENST00000503418 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms