RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 MRAP2Q96G30 205 aa8.11□□□□□ -1.11
USF1-207ENST00000496363 ST20Q9HBF5 79 aa8.11□□□□□ -1.11
USF1-207ENST00000496363 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
USF1-207ENST00000496363 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
USF1-207ENST00000496363 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 POLR2KP53803 58 aaKnown RBP8.09□□□□□ -1.11
USF1-207ENST00000496363 SYCNQ0VAF6 134 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 SS18Q15532 418 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 CT83Q5H943 113 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 ALKAL2Q6UX46 152 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 BORCS7Q96B45 105 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 LINC00474Q9P2X8 69 aa8.09□□□□□ -1.11
USF1-207ENST00000496363 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 HIGD1CA8MV81 97 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 ZNF561-AS1K7EIQ3 104 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 RAB4AP20338 218 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 CD164L2Q6UWJ8 174 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 MRPL52Q86TS9 123 aaKnown RBP8.08□□□□□ -1.12
USF1-207ENST00000496363 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
USF1-207ENST00000496363 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
USF1-207ENST00000496363 C7orf77A4D0Y5 90 aa8.07□□□□□ -1.12
USF1-207ENST00000496363 CAMPP49913 170 aa8.07□□□□□ -1.12
USF1-207ENST00000496363 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
USF1-207ENST00000496363 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
USF1-207ENST00000496363 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
USF1-207ENST00000496363 IGLV4-69A0A075B6H9 119 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 PTTG1IPP53801 180 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 BLOC1S1P78537 153 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 GAGE2BQ13066 116 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 SRSF9Q13242 221 aaKnown RBP eCLIP8.06□□□□□ -1.12
USF1-207ENST00000496363 Q6ZRP5 223 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 LINC01551Q86U37 167 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 SMIM7Q9BQ49 75 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 PKIGQ9Y2B9 76 aa8.06□□□□□ -1.12
USF1-207ENST00000496363 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
USF1-207ENST00000496363 LPAP08519 4548 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 A0A1W2PNN7 141 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 COX7A2LO14548 114 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 MALP21145 153 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 FCER1GP30273 86 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 NRACQ8N912 160 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
USF1-207ENST00000496363 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 ZNF727A8MUV8 499 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 VCYO14598 125 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 Q6ZUT4 128 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 C5orf38Q86SI9 138 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 NUP35Q8NFH5 326 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 FAM210AQ96ND0 272 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 EIF5A2Q9GZV4 153 aaKnown RBP8.03□□□□□ -1.12
USF1-207ENST00000496363 V9GYV3 84 aa8.03□□□□□ -1.12
USF1-207ENST00000496363 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
USF1-207ENST00000496363 SRP19P09132 144 aaKnown RBP8.02□□□□□ -1.13
USF1-207ENST00000496363 SUMO2P61956 95 aaKnown RBP8.02□□□□□ -1.13
USF1-207ENST00000496363 RIGQ13278 110 aa8.02□□□□□ -1.13
USF1-207ENST00000496363 AKAP14Q86UN6 197 aa8.02□□□□□ -1.13
USF1-207ENST00000496363 hCG_2014768A0A024R1R8 64 aa8.01□□□□□ -1.13
USF1-207ENST00000496363 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.01□□□□□ -1.13
USF1-207ENST00000496363 APOMO95445 188 aa8.01□□□□□ -1.13
USF1-207ENST00000496363 OPRPNQ99935 248 aaPredicted RBP8.01□□□□□ -1.13
USF1-207ENST00000496363 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
USF1-207ENST00000496363 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
USF1-207ENST00000496363 SPAG11BQ08648 103 aa8□□□□□ -1.13
USF1-207ENST00000496363 MRPL51Q4U2R6 128 aaKnown RBP8□□□□□ -1.13
USF1-207ENST00000496363 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
USF1-207ENST00000496363 PHF5AQ7RTV0 110 aaKnown RBP8□□□□□ -1.13
USF1-207ENST00000496363 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
USF1-207ENST00000496363 C2orf48Q96LS8 159 aa7.99□□□□□ -1.13
USF1-207ENST00000496363 KIR2DL4Q99706 377 aa7.99□□□□□ -1.13
USF1-207ENST00000496363 PPP1R17O96001 155 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 MT-ND6P03923 174 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 RPL39P62891 51 aaKnown RBP7.98□□□□□ -1.13
USF1-207ENST00000496363 SMAGPQ0VAQ4 97 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 FAM104AQ969W3 186 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 NAT8BQ9UHF3 227 aa7.98□□□□□ -1.13
USF1-207ENST00000496363 PPP1R2P9O14990 202 aa7.97□□□□□ -1.13
USF1-207ENST00000496363 RPL23P62829 140 aaKnown RBP7.97□□□□□ -1.13
USF1-207ENST00000496363 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
USF1-207ENST00000496363 TIMM21Q9BVV7 248 aa7.97□□□□□ -1.13
USF1-207ENST00000496363 ADIRFQ15847 76 aa7.96□□□□□ -1.14
USF1-207ENST00000496363 TMEM241Q24JQ0 296 aa7.96□□□□□ -1.14
USF1-207ENST00000496363 FAM74A3Q4VXF1 159 aa7.96□□□□□ -1.14
USF1-207ENST00000496363 ORAOV1Q8WV07 137 aa7.96□□□□□ -1.14
USF1-207ENST00000496363 FAM168BA1KXE4 195 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 C9JQL5 133 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 CKS2P33552 79 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 TMEM18Q96B42 140 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 C20orf78Q9BR46 151 aa7.95□□□□□ -1.14
USF1-207ENST00000496363 TRBV24-1A0A075B6N3 115 aa7.94□□□□□ -1.14
USF1-207ENST00000496363 SMIM27A0A1W2PRY6 76 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms