RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CCL25O15444 150 aa7.89□□□□□ -1.15
SKA1-205ENST00000494518 GAS8-AS1O95177 125 aa7.89□□□□□ -1.15
SKA1-205ENST00000494518 NCR2O95944 276 aa7.89□□□□□ -1.15
SKA1-205ENST00000494518 EIF5AL1Q6IS14 154 aaKnown RBP7.89□□□□□ -1.15
SKA1-205ENST00000494518 SMIM15Q7Z3B0 74 aa7.89□□□□□ -1.15
SKA1-205ENST00000494518 PMCHP20382 165 aa7.88□□□□□ -1.15
SKA1-205ENST00000494518 OR5A1Q8NGJ0 315 aa7.88□□□□□ -1.15
SKA1-205ENST00000494518 TMEM242Q9NWH2 141 aa7.88□□□□□ -1.15
SKA1-205ENST00000494518 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
SKA1-205ENST00000494518 FAM231BA6NCW3 169 aa7.87□□□□□ -1.15
SKA1-205ENST00000494518 GATCO43716 136 aaKnown RBP7.87□□□□□ -1.15
SKA1-205ENST00000494518 TMEM101Q96IK0 257 aa7.87□□□□□ -1.15
SKA1-205ENST00000494518 BTF3L4Q96K17 158 aa7.87□□□□□ -1.15
SKA1-205ENST00000494518 CARD19Q96LW7 228 aa7.87□□□□□ -1.15
SKA1-205ENST00000494518 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
SKA1-205ENST00000494518 H7C423 109 aa7.86□□□□□ -1.15
SKA1-205ENST00000494518 I3L3M4 83 aa7.86□□□□□ -1.15
SKA1-205ENST00000494518 TSHBP01222 138 aa7.86□□□□□ -1.15
SKA1-205ENST00000494518 A0A0J9YXV3 536 aa7.85□□□□□ -1.15
SKA1-205ENST00000494518 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
SKA1-205ENST00000494518 CEBPGP53567 150 aa7.85□□□□□ -1.15
SKA1-205ENST00000494518 LCE1DQ5T752 114 aa7.85□□□□□ -1.15
SKA1-205ENST00000494518 ESDP10768 282 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 SYCNQ0VAF6 134 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 GAGE2BQ13066 116 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 SS18Q15532 418 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 TEX261Q6UWH6 196 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 ST20Q9HBF5 79 aa7.84□□□□□ -1.15
SKA1-205ENST00000494518 LPAP08519 4548 aa7.84□□□□□ -1.16
SKA1-205ENST00000494518 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
SKA1-205ENST00000494518 RNASE13Q5GAN3 156 aaKnown RBP7.83□□□□□ -1.16
SKA1-205ENST00000494518 SPINK6Q6UWN8 80 aa7.83□□□□□ -1.16
SKA1-205ENST00000494518 SLC51BQ86UW2 128 aa7.83□□□□□ -1.16
SKA1-205ENST00000494518 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
SKA1-205ENST00000494518 TRBV6-5A0A0K0K1A5 114 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 A8MWL6 223 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 SMKR1H3BMG3 65 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
SKA1-205ENST00000494518 CAMPP49913 170 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 Q6ZRP5 223 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
SKA1-205ENST00000494518 IGLV4-69A0A075B6H9 119 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 C7orf77A4D0Y5 90 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 PTTG1IPP53801 180 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 SRSF9Q13242 221 aaKnown RBP eCLIP7.81□□□□□ -1.16
SKA1-205ENST00000494518 CD164L2Q6UWJ8 174 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 BORCS7Q96B45 105 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 PKIGQ9Y2B9 76 aa7.81□□□□□ -1.16
SKA1-205ENST00000494518 MALP21145 153 aa7.8□□□□□ -1.16
SKA1-205ENST00000494518 FAM231DQ6ZW35 169 aa7.8□□□□□ -1.16
SKA1-205ENST00000494518 AMN1Q8IY45 258 aa7.8□□□□□ -1.16
SKA1-205ENST00000494518 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 A0A1B0GUT8 65 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 HIGD1CA8MV81 97 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 RAB4AP20338 218 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
SKA1-205ENST00000494518 ALKAL2Q6UX46 152 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
SKA1-205ENST00000494518 TCTE3Q8IZS6 198 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 TMEM191AQ9H0A3 160 aa7.79□□□□□ -1.16
SKA1-205ENST00000494518 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 TMEM250H0YL14 139 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 COX7A2LO14548 114 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 FCER1GP30273 86 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
SKA1-205ENST00000494518 C5orf38Q86SI9 138 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
SKA1-205ENST00000494518 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 C9orf116Q5BN46 136 aaPredicted RBP7.77□□□□□ -1.17
SKA1-205ENST00000494518 CT83Q5H943 113 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 Q6ZUT4 128 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 PHF5AQ7RTV0 110 aaKnown RBP7.77□□□□□ -1.17
SKA1-205ENST00000494518 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 TSKUQ8WUA8 353 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
SKA1-205ENST00000494518 SMIM7Q9BQ49 75 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 PSORS1C2Q9UIG4 136 aa7.77□□□□□ -1.17
SKA1-205ENST00000494518 C1orf196B1AJZ1 125 aa7.76□□□□□ -1.17
SKA1-205ENST00000494518 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
SKA1-205ENST00000494518 MT-ND6P03923 174 aa7.76□□□□□ -1.17
SKA1-205ENST00000494518 UBE2D4Q9Y2X8 147 aa7.76□□□□□ -1.17
SKA1-205ENST00000494518 VCYO14598 125 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 APOMO95445 188 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 SPAG11BQ08648 103 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 C1orf137Q5JT78 98 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 LINC01551Q86U37 167 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 NRACQ8N912 160 aa7.75□□□□□ -1.17
SKA1-205ENST00000494518 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
SKA1-205ENST00000494518 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
SKA1-205ENST00000494518 SUMO2P61956 95 aaKnown RBP7.73□□□□□ -1.17
SKA1-205ENST00000494518 RIGQ13278 110 aa7.73□□□□□ -1.17
SKA1-205ENST00000494518 OSTCQ9NRP0 149 aa7.73□□□□□ -1.17
SKA1-205ENST00000494518 V9GYV3 84 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms