RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MT-ND6P03923 174 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 CAMPP49913 170 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
UBR4-216ENST00000494503 OCC1Q8TAD7 63 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 ISOC2Q96AB3 205 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 CNFNQ9BYD5 112 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 ST20Q9HBF5 79 aa5.99□□□□□ -1.45
UBR4-216ENST00000494503 LOC107984640A0A0U1RRK4 108 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 K7EN84 100 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 FCER1GP30273 86 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 PTTG1IPP53801 180 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 TNXBP22105 4242 aa5.98□□□□□ -1.45
UBR4-216ENST00000494503 IGLV4-69A0A075B6H9 119 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 FAM231BA6NCW3 169 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 GAS8-AS1O95177 125 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 TSHBP01222 138 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 RNASE13Q5GAN3 156 aaKnown RBP5.97□□□□□ -1.45
UBR4-216ENST00000494503 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
UBR4-216ENST00000494503 TRAV13-1A0A0B4J241 112 aa5.96□□□□□ -1.46
UBR4-216ENST00000494503 A8MWL6 223 aa5.96□□□□□ -1.46
UBR4-216ENST00000494503 COX7A2LO14548 114 aa5.96□□□□□ -1.46
UBR4-216ENST00000494503 TAGLN2P37802 199 aaKnown RBP5.96□□□□□ -1.46
UBR4-216ENST00000494503 C1orf137Q5JT78 98 aa5.96□□□□□ -1.46
UBR4-216ENST00000494503 ZNF664Q8N3J9 261 aa5.96□□□□□ -1.46
UBR4-216ENST00000494503 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
UBR4-216ENST00000494503 CDC42SE2Q9NRR3 84 aa5.95□□□□□ -1.46
UBR4-216ENST00000494503 TRBV6-5A0A0K0K1A5 114 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 C1orf196B1AJZ1 125 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 SMKR1H3BMG3 65 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 APOMO95445 188 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 ESDP10768 282 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 SPAG11BQ08648 103 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 SMAGPQ0VAQ4 97 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 C9orf116Q5BN46 136 aaPredicted RBP5.94□□□□□ -1.46
UBR4-216ENST00000494503 C5orf38Q86SI9 138 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 OPRPNQ99935 248 aaPredicted RBP5.94□□□□□ -1.46
UBR4-216ENST00000494503 PSORS1C2Q9UIG4 136 aa5.94□□□□□ -1.46
UBR4-216ENST00000494503 TMA7Q9Y2S6 64 aaKnown RBP5.94□□□□□ -1.46
UBR4-216ENST00000494503 A0A1B0GUT8 65 aa5.93□□□□□ -1.46
UBR4-216ENST00000494503 HIGD1CA8MV81 97 aa5.93□□□□□ -1.46
UBR4-216ENST00000494503 SRSF9Q13242 221 aaKnown RBP eCLIP5.93□□□□□ -1.46
UBR4-216ENST00000494503 PHF5AQ7RTV0 110 aaKnown RBP5.93□□□□□ -1.46
UBR4-216ENST00000494503 MRPL52Q86TS9 123 aaKnown RBP5.93□□□□□ -1.46
UBR4-216ENST00000494503 SLC51BQ86UW2 128 aa5.93□□□□□ -1.46
UBR4-216ENST00000494503 AMN1Q8IY45 258 aa5.93□□□□□ -1.46
UBR4-216ENST00000494503 KIR2DL4Q99706 377 aa5.93□□□□□ -1.46
UBR4-216ENST00000494503 A0A087WZ39 114 aa5.92□□□□□ -1.46
UBR4-216ENST00000494503 VCYO14598 125 aa5.92□□□□□ -1.46
UBR4-216ENST00000494503 Q6ZUT4 128 aa5.92□□□□□ -1.46
UBR4-216ENST00000494503 NUP35Q8NFH5 326 aa5.92□□□□□ -1.46
UBR4-216ENST00000494503 TMEM191AQ9H0A3 160 aa5.92□□□□□ -1.46
UBR4-216ENST00000494503 TRBV27A0A0K0K1C4 114 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.91□□□□□ -1.46
UBR4-216ENST00000494503 RAB4AP20338 218 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 FAM231DQ6ZW35 169 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 ORAOV1Q8WV07 137 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 TMEM18Q96B42 140 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 SMIM7Q9BQ49 75 aa5.91□□□□□ -1.46
UBR4-216ENST00000494503 EIF5A2Q9GZV4 153 aaKnown RBP5.91□□□□□ -1.46
UBR4-216ENST00000494503 POLR2KP53803 58 aaKnown RBP5.9□□□□□ -1.46
UBR4-216ENST00000494503 SUMO2P61956 95 aaKnown RBP5.9□□□□□ -1.46
UBR4-216ENST00000494503 RIGQ13278 110 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 CT83Q5H943 113 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 ALKAL2Q6UX46 152 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 FAM19A5Q7Z5A7 132 aaPredicted RBP5.9□□□□□ -1.46
UBR4-216ENST00000494503 PRR26Q8N8Z3 221 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 TSKUQ8WUA8 353 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 DIRC1Q969H9 104 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 UBE2D4Q9Y2X8 147 aa5.9□□□□□ -1.46
UBR4-216ENST00000494503 ZNF727A8MUV8 499 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 PPP1R17O96001 155 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 UBE2D1P51668 147 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 UBE2BP63146 152 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 BLOC1S1P78537 153 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 C2orf48Q96LS8 159 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 FAM210AQ96ND0 272 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
UBR4-216ENST00000494503 FAM168BA1KXE4 195 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 PPP1R2P9O14990 202 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 NDUFA1O15239 70 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 IGLV7-43P04211 117 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 LINC01551Q86U37 167 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 IMMP2LQ96T52 175 aa5.88□□□□□ -1.47
UBR4-216ENST00000494503 IFITM10A6NMD0 228 aa5.87□□□□□ -1.47
UBR4-216ENST00000494503 RPL39P62891 51 aaKnown RBP5.87□□□□□ -1.47
UBR4-216ENST00000494503 PRR4Q16378 134 aa5.87□□□□□ -1.47
UBR4-216ENST00000494503 TCTE3Q8IZS6 198 aa5.87□□□□□ -1.47
UBR4-216ENST00000494503 NRACQ8N912 160 aa5.87□□□□□ -1.47
UBR4-216ENST00000494503 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
UBR4-216ENST00000494503 CSDC2Q9Y534 153 aaKnown RBP5.87□□□□□ -1.47
UBR4-216ENST00000494503 H0Y9J4 135 aa5.86□□□□□ -1.47
UBR4-216ENST00000494503 CKS2P33552 79 aa5.86□□□□□ -1.47
UBR4-216ENST00000494503 MRPL51Q4U2R6 128 aaKnown RBP5.86□□□□□ -1.47
UBR4-216ENST00000494503 OSTCQ9NRP0 149 aa5.86□□□□□ -1.47
UBR4-216ENST00000494503 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms