RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ESDP10768 282 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 MANBALQ9NQG1 85 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 GNG13Q9P2W3 67 aa7.06□□□□□ -1.28
CACNA1C-228ENST00000492150 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
CACNA1C-228ENST00000492150 MEF2BQ02080 365 aaPredicted RBP7.05□□□□□ -1.28
CACNA1C-228ENST00000492150 SS18Q15532 418 aa7.05□□□□□ -1.28
CACNA1C-228ENST00000492150 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
CACNA1C-228ENST00000492150 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
CACNA1C-228ENST00000492150 I3L3M4 83 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 TSHBP01222 138 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 PMCHP20382 165 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 ZNF345Q14585 488 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 DIRC1Q969H9 104 aa7.04□□□□□ -1.28
CACNA1C-228ENST00000492150 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 TRBV6-5A0A0K0K1A5 114 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 APOMO95445 188 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 MRPL52Q86TS9 123 aaKnown RBP7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 BIN3Q9NQY0 253 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 TMEM242Q9NWH2 141 aa7.03□□□□□ -1.28
CACNA1C-228ENST00000492150 H0Y9J4 135 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 BCL2L11O43521 198 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 EIF5AP63241 154 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 RPL18AQ02543 176 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 EIF5AL1Q6IS14 154 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 RPP21Q9H633 154 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 MED9Q9NWA0 146 aa7.02□□□□□ -1.29
CACNA1C-228ENST00000492150 IGLV1-50A0A075B6I6 118 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 COX7A2LO14548 114 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 PDE6DO43924 150 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 MALP21145 153 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 SMIM15Q7Z3B0 74 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 MRAP2Q96G30 205 aa7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 RNASE7Q9H1E1 156 aaKnown RBP7.01□□□□□ -1.29
CACNA1C-228ENST00000492150 C1orf196B1AJZ1 125 aa7□□□□□ -1.29
CACNA1C-228ENST00000492150 K7EN84 100 aa7□□□□□ -1.29
CACNA1C-228ENST00000492150 POLR2KP53803 58 aaKnown RBP7□□□□□ -1.29
CACNA1C-228ENST00000492150 ST20Q9HBF5 79 aa7□□□□□ -1.29
CACNA1C-228ENST00000492150 A0A087WZ39 114 aa6.99□□□□□ -1.29
CACNA1C-228ENST00000492150 KANTRA0A1W2PQU2 76 aa6.99□□□□□ -1.29
CACNA1C-228ENST00000492150 HMSDA8MTL9 139 aa6.99□□□□□ -1.29
CACNA1C-228ENST00000492150 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
CACNA1C-228ENST00000492150 OCC1Q8TAD7 63 aa6.99□□□□□ -1.29
CACNA1C-228ENST00000492150 TRBV27A0A0K0K1C4 114 aa6.98□□□□□ -1.29
CACNA1C-228ENST00000492150 FAM168BA1KXE4 195 aa6.98□□□□□ -1.29
CACNA1C-228ENST00000492150 C7orf77A4D0Y5 90 aa6.98□□□□□ -1.29
CACNA1C-228ENST00000492150 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
CACNA1C-228ENST00000492150 FAM210AQ96ND0 272 aa6.98□□□□□ -1.29
CACNA1C-228ENST00000492150 RNASE13Q5GAN3 156 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-228ENST00000492150 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
CACNA1C-228ENST00000492150 SPAG11BQ08648 103 aa6.96□□□□□ -1.3
CACNA1C-228ENST00000492150 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
CACNA1C-228ENST00000492150 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
CACNA1C-228ENST00000492150 CSDC2Q9Y534 153 aaKnown RBP6.96□□□□□ -1.3
CACNA1C-228ENST00000492150 TEX46H3BTG2 121 aa6.95□□□□□ -1.3
CACNA1C-228ENST00000492150 GATCO43716 136 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-228ENST00000492150 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
CACNA1C-228ENST00000492150 TSKUQ8WUA8 353 aa6.95□□□□□ -1.3
CACNA1C-228ENST00000492150 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
CACNA1C-228ENST00000492150 RAB4AP20338 218 aa6.94□□□□□ -1.3
CACNA1C-228ENST00000492150 UBE2D1P51668 147 aa6.94□□□□□ -1.3
CACNA1C-228ENST00000492150 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-228ENST00000492150 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
CACNA1C-228ENST00000492150 A8MWL6 223 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 RPL13AP40429 203 aaKnown RBP6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 Q6ZUT4 128 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 IMMP2LQ96T52 175 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 TMEM191AQ9H0A3 160 aa6.93□□□□□ -1.3
CACNA1C-228ENST00000492150 F8WDY8 70 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 SMKR1H3BMG3 65 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 VCYO14598 125 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 FCER1GP30273 86 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 UNQ6190/PRO20217Q6UXQ8 127 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 C6orf48Q9UBA6 75 aa6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 CARHSP1Q9Y2V2 147 aaKnown RBP6.92□□□□□ -1.3
CACNA1C-228ENST00000492150 NDUFA1O15239 70 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 SMAGPQ0VAQ4 97 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 NRACQ8N912 160 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
CACNA1C-228ENST00000492150 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms