RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 LINC00959A0A1B0GUT2 108 aa11.45□□□□□ -0.58
HMGN1-219ENST00000491183 NRACQ8N912 160 aa11.45□□□□□ -0.58
HMGN1-219ENST00000491183 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
HMGN1-219ENST00000491183 NAT8Q9UHE5 227 aa11.45□□□□□ -0.58
HMGN1-219ENST00000491183 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
HMGN1-219ENST00000491183 ADIRFQ15847 76 aa11.44□□□□□ -0.58
HMGN1-219ENST00000491183 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
HMGN1-219ENST00000491183 CDC42SE2Q9NRR3 84 aa11.44□□□□□ -0.58
HMGN1-219ENST00000491183 A0A087WYN8 130 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
HMGN1-219ENST00000491183 SMIM27A0A1W2PRY6 76 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 VCYO14598 125 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 CCL25O15444 150 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 XCL1P47992 114 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
HMGN1-219ENST00000491183 OXTP01178 125 aa11.42□□□□□ -0.58
HMGN1-219ENST00000491183 COX6A2Q02221 97 aa11.42□□□□□ -0.58
HMGN1-219ENST00000491183 PEA15Q15121 130 aa11.42□□□□□ -0.58
HMGN1-219ENST00000491183 MRPL51Q4U2R6 128 aaKnown RBP11.42□□□□□ -0.58
HMGN1-219ENST00000491183 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
HMGN1-219ENST00000491183 C7orf77A4D0Y5 90 aa11.41□□□□□ -0.58
HMGN1-219ENST00000491183 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
HMGN1-219ENST00000491183 ZNF664Q8N3J9 261 aa11.41□□□□□ -0.58
HMGN1-219ENST00000491183 PRSS3P2Q8NHM4 247 aa11.41□□□□□ -0.58
HMGN1-219ENST00000491183 CAMPP49913 170 aa11.4□□□□□ -0.58
HMGN1-219ENST00000491183 SMDT1Q9H4I9 107 aa11.4□□□□□ -0.58
HMGN1-219ENST00000491183 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.58
HMGN1-219ENST00000491183 PKHD1L1Q86WI1 4243 aa11.4□□□□□ -0.59
HMGN1-219ENST00000491183 PPP1R17O96001 155 aa11.39□□□□□ -0.59
HMGN1-219ENST00000491183 FCER1GP30273 86 aa11.39□□□□□ -0.59
HMGN1-219ENST00000491183 SS18Q15532 418 aa11.39□□□□□ -0.59
HMGN1-219ENST00000491183 LINC00526Q96FQ7 95 aa11.39□□□□□ -0.59
HMGN1-219ENST00000491183 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
HMGN1-219ENST00000491183 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
HMGN1-219ENST00000491183 UBE2D4Q9Y2X8 147 aa11.38□□□□□ -0.59
HMGN1-219ENST00000491183 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
HMGN1-219ENST00000491183 LINC00862A6NCI5 91 aa11.37□□□□□ -0.59
HMGN1-219ENST00000491183 CSDC2Q9Y534 153 aaKnown RBP11.37□□□□□ -0.59
HMGN1-219ENST00000491183 TRBV24-1A0A075B6N3 115 aa11.36□□□□□ -0.59
HMGN1-219ENST00000491183 PPP1R2P9O14990 202 aa11.36□□□□□ -0.59
HMGN1-219ENST00000491183 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
HMGN1-219ENST00000491183 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
HMGN1-219ENST00000491183 A0A1B0GW15 77 aa11.35□□□□□ -0.59
HMGN1-219ENST00000491183 MAJINQ3KP22 176 aa11.35□□□□□ -0.59
HMGN1-219ENST00000491183 RNASE13Q5GAN3 156 aaKnown RBP11.35□□□□□ -0.59
HMGN1-219ENST00000491183 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
HMGN1-219ENST00000491183 A0A096LNI7 61 aa11.34□□□□□ -0.59
HMGN1-219ENST00000491183 A0A1B0GXF2 115 aa11.34□□□□□ -0.59
HMGN1-219ENST00000491183 CKS2P33552 79 aa11.34□□□□□ -0.59
HMGN1-219ENST00000491183 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
HMGN1-219ENST00000491183 C1orf196B1AJZ1 125 aa11.33□□□□□ -0.6
HMGN1-219ENST00000491183 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
HMGN1-219ENST00000491183 RPL32P62910 135 aaKnown RBP11.33□□□□□ -0.6
HMGN1-219ENST00000491183 PHOX2AO14813 284 aa11.32□□□□□ -0.6
HMGN1-219ENST00000491183 Q6ZUT4 128 aa11.32□□□□□ -0.6
HMGN1-219ENST00000491183 STPG4Q8N801 248 aa11.32□□□□□ -0.6
HMGN1-219ENST00000491183 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
HMGN1-219ENST00000491183 D6R8Y8 96 aa11.31□□□□□ -0.6
HMGN1-219ENST00000491183 HBBP68871 147 aa11.31□□□□□ -0.6
HMGN1-219ENST00000491183 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
HMGN1-219ENST00000491183 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
HMGN1-219ENST00000491183 CARD19Q96LW7 228 aa11.31□□□□□ -0.6
HMGN1-219ENST00000491183 TRAV13-1A0A0B4J241 112 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 F8W036 122 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 ZNF561-AS1K7EIQ3 104 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 NPYP01303 97 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
HMGN1-219ENST00000491183 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 Q6ZRU5 148 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 TMEM18Q96B42 140 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 SMIM2Q9BVW6 85 aa11.3□□□□□ -0.6
HMGN1-219ENST00000491183 IGLV4-69A0A075B6H9 119 aa11.29□□□□□ -0.6
HMGN1-219ENST00000491183 COX7A2LO14548 114 aa11.29□□□□□ -0.6
HMGN1-219ENST00000491183 S100A8P05109 93 aa11.29□□□□□ -0.6
HMGN1-219ENST00000491183 SERTAD4-AS1Q5TG53 156 aa11.29□□□□□ -0.6
HMGN1-219ENST00000491183 C7orf33Q8WU49 177 aa11.29□□□□□ -0.6
HMGN1-219ENST00000491183 MT1HL1P0DM35 61 aa11.28□□□□□ -0.6
HMGN1-219ENST00000491183 MALP21145 153 aa11.28□□□□□ -0.6
HMGN1-219ENST00000491183 C5orf38Q86SI9 138 aa11.28□□□□□ -0.6
HMGN1-219ENST00000491183 TCAPO15273 167 aa11.27□□□□□ -0.61
HMGN1-219ENST00000491183 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.61
HMGN1-219ENST00000491183 LINC00474Q9P2X8 69 aa11.27□□□□□ -0.61
HMGN1-219ENST00000491183 PPBPP02775 128 aa11.26□□□□□ -0.61
HMGN1-219ENST00000491183 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
HMGN1-219ENST00000491183 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
HMGN1-219ENST00000491183 TMEM136Q6ZRR5 245 aa11.24□□□□□ -0.61
HMGN1-219ENST00000491183 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
HMGN1-219ENST00000491183 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
HMGN1-219ENST00000491183 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
HMGN1-219ENST00000491183 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
HMGN1-219ENST00000491183 C2orf48Q96LS8 159 aa11.23□□□□□ -0.61
HMGN1-219ENST00000491183 PRELID3AQ96N28 172 aa11.23□□□□□ -0.61
HMGN1-219ENST00000491183 CAMK2N2Q96S95 79 aa11.23□□□□□ -0.61
HMGN1-219ENST00000491183 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
HMGN1-219ENST00000491183 IGHV3OR16-9A0A0B4J2B5 98 aa11.22□□□□□ -0.61
HMGN1-219ENST00000491183 LOC107984640A0A0U1RRK4 108 aa11.22□□□□□ -0.61
HMGN1-219ENST00000491183 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
HMGN1-219ENST00000491183 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
HMGN1-219ENST00000491183 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms