RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 OR5A1Q8NGJ0 315 aa5.71□□□□□ -1.5
GTF3C5-210ENST00000489842 SMIM7Q9BQ49 75 aa5.71□□□□□ -1.5
GTF3C5-210ENST00000489842 EIF5A2Q9GZV4 153 aaKnown RBP5.71□□□□□ -1.5
GTF3C5-210ENST00000489842 LRP2P98164 4655 aa5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 GVQW2A0A096LPI5 108 aaPredicted RBP5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 NDUFS6O75380 124 aaKnown RBP5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 TAGLN2P37802 199 aaKnown RBP5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 POLR2KP53803 58 aaKnown RBP5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 SRSF3P84103 164 aaKnown RBP5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 V9GYV3 84 aa5.7□□□□□ -1.5
GTF3C5-210ENST00000489842 A0A1B0GUT8 65 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 LINC00862A6NCI5 91 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 ZNF727A8MUV8 499 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 CFAP161Q6P656 301 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 NUP35Q8NFH5 326 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 TSKUQ8WUA8 353 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 SMDT1Q9H4I9 107 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
GTF3C5-210ENST00000489842 A0A0J9YXV3 536 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 Q6ZRU5 148 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 NRACQ8N912 160 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 BTF3L4Q96K17 158 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 FAM210AQ96ND0 272 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 TMEM191AQ9H0A3 160 aa5.68□□□□□ -1.5
GTF3C5-210ENST00000489842 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 H7C423 109 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 MRPL51Q4U2R6 128 aaKnown RBP5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 CT83Q5H943 113 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 UQCC3Q6UW78 93 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 Q6ZUT4 128 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 C5orf38Q86SI9 138 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 ISOC2Q96AB3 205 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 CARD19Q96LW7 228 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 OSTCQ9NRP0 149 aa5.67□□□□□ -1.5
GTF3C5-210ENST00000489842 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 IGHV1-58A0A0C4DH39 117 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 RPL39P62891 51 aaKnown RBP5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 GAGE2BQ13066 116 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 ADIRFQ15847 76 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 C7orf33Q8WU49 177 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 FAM104AQ969W3 186 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 UBE2D4Q9Y2X8 147 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 LPAP08519 4548 aa5.66□□□□□ -1.5
GTF3C5-210ENST00000489842 TRAV13-1A0A0B4J241 112 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 S100A1P23297 94 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 CAMPP49913 170 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 SYCNQ0VAF6 134 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 RIGQ13278 110 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 SS18Q15532 418 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 CD164L2Q6UWJ8 174 aa5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 MRPL52Q86TS9 123 aaKnown RBP5.65□□□□□ -1.5
GTF3C5-210ENST00000489842 ZNF561-AS1K7EIQ3 104 aa5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 FCER1GP30273 86 aa5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 SUMO2P61956 95 aaKnown RBP5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 TMEM241Q24JQ0 296 aa5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 FAM104BQ5XKR9 115 aa5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
GTF3C5-210ENST00000489842 VCYO14598 125 aa5.63□□□□□ -1.51
GTF3C5-210ENST00000489842 TCAPO15273 167 aa5.63□□□□□ -1.51
GTF3C5-210ENST00000489842 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
GTF3C5-210ENST00000489842 SMIM27A0A1W2PRY6 76 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 COX7A2LO14548 114 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 NPYP01303 97 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 MALP21145 153 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 PTTG1IPP53801 180 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 SRSF9Q13242 221 aaKnown RBP eCLIP5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 PEA15Q15121 130 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 FAM74A3Q4VXF1 159 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 C10orf25Q5T742 122 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
GTF3C5-210ENST00000489842 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 D6R8Y8 96 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 CKS2P33552 79 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 KRTAP10-8P60410 259 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 RPL18AQ02543 176 aaKnown RBP5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 C9orf116Q5BN46 136 aaPredicted RBP5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 ZC2HC1BQ5TFG8 222 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 CAMK2N2Q96S95 79 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 NAT8BQ9UHF3 227 aa5.61□□□□□ -1.51
GTF3C5-210ENST00000489842 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
GTF3C5-210ENST00000489842 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
GTF3C5-210ENST00000489842 SPAG11BQ08648 103 aa5.6□□□□□ -1.51
GTF3C5-210ENST00000489842 COMMD7Q86VX2 200 aa5.6□□□□□ -1.51
GTF3C5-210ENST00000489842 NAT8Q9UHE5 227 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms