RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 NUP35Q8NFH5 326 aa13.98□□□□□ -0.17
HOXA9-205ENST00000489695 ST20Q9HBF5 79 aa13.98□□□□□ -0.17
HOXA9-205ENST00000489695 A0A0J9YXV3 536 aa13.97□□□□□ -0.17
HOXA9-205ENST00000489695 C9JQL5 133 aa13.97□□□□□ -0.17
HOXA9-205ENST00000489695 ZNF25P17030 456 aaPredicted RBP13.97□□□□□ -0.17
HOXA9-205ENST00000489695 KRTAP10-8P60410 259 aa13.97□□□□□ -0.17
HOXA9-205ENST00000489695 RPL23P62829 140 aaKnown RBP13.97□□□□□ -0.17
HOXA9-205ENST00000489695 MRAP2Q96G30 205 aa13.97□□□□□ -0.17
HOXA9-205ENST00000489695 TSHBP01222 138 aa13.96□□□□□ -0.17
HOXA9-205ENST00000489695 RIGQ13278 110 aa13.96□□□□□ -0.17
HOXA9-205ENST00000489695 SMDT1Q9H4I9 107 aa13.96□□□□□ -0.17
HOXA9-205ENST00000489695 TRBV27A0A0K0K1C4 114 aa13.95□□□□□ -0.18
HOXA9-205ENST00000489695 GAGE12HA6NDE8 117 aa13.95□□□□□ -0.18
HOXA9-205ENST00000489695 RPS10P46783 165 aaKnown RBP13.95□□□□□ -0.18
HOXA9-205ENST00000489695 COX6A2Q02221 97 aa13.95□□□□□ -0.18
HOXA9-205ENST00000489695 RNASEKQ6P5S7 137 aaKnown RBP13.95□□□□□ -0.18
HOXA9-205ENST00000489695 AMN1Q8IY45 258 aa13.95□□□□□ -0.18
HOXA9-205ENST00000489695 CFAP161Q6P656 301 aa13.94□□□□□ -0.18
HOXA9-205ENST00000489695 C15orf56Q8N910 161 aa13.94□□□□□ -0.18
HOXA9-205ENST00000489695 CHCHD10Q8WYQ3 142 aaPredicted RBP13.94□□□□□ -0.18
HOXA9-205ENST00000489695 NAT8Q9UHE5 227 aa13.94□□□□□ -0.18
HOXA9-205ENST00000489695 NAT8BQ9UHF3 227 aa13.94□□□□□ -0.18
HOXA9-205ENST00000489695 IGKV3OR2-268A0A0C4DH90 116 aa13.93□□□□□ -0.18
HOXA9-205ENST00000489695 SRSF3P84103 164 aaKnown RBP13.93□□□□□ -0.18
HOXA9-205ENST00000489695 PEA15Q15121 130 aa13.93□□□□□ -0.18
HOXA9-205ENST00000489695 OR5A1Q8NGJ0 315 aa13.93□□□□□ -0.18
HOXA9-205ENST00000489695 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
HOXA9-205ENST00000489695 MAJINQ3KP22 176 aa13.92□□□□□ -0.18
HOXA9-205ENST00000489695 SMIM27A0A1W2PRY6 76 aa13.91□□□□□ -0.18
HOXA9-205ENST00000489695 ADIRFQ15847 76 aa13.91□□□□□ -0.18
HOXA9-205ENST00000489695 MRPL52Q86TS9 123 aaKnown RBP13.91□□□□□ -0.18
HOXA9-205ENST00000489695 PRSS3P2Q8NHM4 247 aa13.91□□□□□ -0.18
HOXA9-205ENST00000489695 TMEM101Q96IK0 257 aa13.91□□□□□ -0.18
HOXA9-205ENST00000489695 BTF3L4Q96K17 158 aa13.91□□□□□ -0.18
HOXA9-205ENST00000489695 VCYO14598 125 aa13.9□□□□□ -0.18
HOXA9-205ENST00000489695 PPP1R17O96001 155 aa13.9□□□□□ -0.18
HOXA9-205ENST00000489695 SPINK6Q6UWN8 80 aa13.9□□□□□ -0.18
HOXA9-205ENST00000489695 NRACQ8N912 160 aa13.9□□□□□ -0.18
HOXA9-205ENST00000489695 FOXI1Q12951 378 aa13.89□□□□□ -0.19
HOXA9-205ENST00000489695 STPG4Q8N801 248 aa13.89□□□□□ -0.19
HOXA9-205ENST00000489695 CDC42SE2Q9NRR3 84 aa13.89□□□□□ -0.19
HOXA9-205ENST00000489695 IGKV2-24A0A0C4DH68 120 aa13.88□□□□□ -0.19
HOXA9-205ENST00000489695 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
HOXA9-205ENST00000489695 SMKR1H3BMG3 65 aa13.88□□□□□ -0.19
HOXA9-205ENST00000489695 FAM104BQ5XKR9 115 aa13.88□□□□□ -0.19
HOXA9-205ENST00000489695 REG3GQ6UW15 175 aa13.88□□□□□ -0.19
HOXA9-205ENST00000489695 GVQW2A0A096LPI5 108 aaPredicted RBP13.87□□□□□ -0.19
HOXA9-205ENST00000489695 C7orf77A4D0Y5 90 aa13.87□□□□□ -0.19
HOXA9-205ENST00000489695 A0A1B0GW15 77 aa13.86□□□□□ -0.19
HOXA9-205ENST00000489695 SUMO2P61956 95 aaKnown RBP13.86□□□□□ -0.19
HOXA9-205ENST00000489695 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
HOXA9-205ENST00000489695 MRPL51Q4U2R6 128 aaKnown RBP13.86□□□□□ -0.19
HOXA9-205ENST00000489695 LINC00862A6NCI5 91 aa13.85□□□□□ -0.19
HOXA9-205ENST00000489695 ZNF664Q8N3J9 261 aa13.85□□□□□ -0.19
HOXA9-205ENST00000489695 PPP1R2P9O14990 202 aa13.84□□□□□ -0.19
HOXA9-205ENST00000489695 HIGD2BQ4VC39 106 aa13.84□□□□□ -0.19
HOXA9-205ENST00000489695 CSDC2Q9Y534 153 aaKnown RBP13.84□□□□□ -0.19
HOXA9-205ENST00000489695 LPAP08519 4548 aa13.84□□□□□ -0.19
HOXA9-205ENST00000489695 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
HOXA9-205ENST00000489695 A0A096LNI7 61 aa13.83□□□□□ -0.2
HOXA9-205ENST00000489695 XCL1P47992 114 aa13.83□□□□□ -0.2
HOXA9-205ENST00000489695 COMMD7Q86VX2 200 aa13.83□□□□□ -0.2
HOXA9-205ENST00000489695 C20orf78Q9BR46 151 aa13.83□□□□□ -0.2
HOXA9-205ENST00000489695 CCL25O15444 150 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 FCER1GP30273 86 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 CAMPP49913 170 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 RPL32P62910 135 aaKnown RBP13.82□□□□□ -0.2
HOXA9-205ENST00000489695 SS18Q15532 418 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 KIR2DL4Q99706 377 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 LINC00474Q9P2X8 69 aa13.82□□□□□ -0.2
HOXA9-205ENST00000489695 SMAGPQ0VAQ4 97 aa13.81□□□□□ -0.2
HOXA9-205ENST00000489695 CD164L2Q6UWJ8 174 aa13.81□□□□□ -0.2
HOXA9-205ENST00000489695 UBE2D4Q9Y2X8 147 aa13.81□□□□□ -0.2
HOXA9-205ENST00000489695 IGHV1-58A0A0C4DH39 117 aa13.8□□□□□ -0.2
HOXA9-205ENST00000489695 A0A1B0GXF2 115 aa13.79□□□□□ -0.2
HOXA9-205ENST00000489695 S100A8P05109 93 aa13.79□□□□□ -0.2
HOXA9-205ENST00000489695 CKS2P33552 79 aa13.78□□□□□ -0.2
HOXA9-205ENST00000489695 Q6ZRP5 223 aa13.78□□□□□ -0.2
HOXA9-205ENST00000489695 TIMM21Q9BVV7 248 aa13.78□□□□□ -0.2
HOXA9-205ENST00000489695 TCAPO15273 167 aa13.77□□□□□ -0.21
HOXA9-205ENST00000489695 HBBP68871 147 aa13.77□□□□□ -0.21
HOXA9-205ENST00000489695 NDUFA5Q16718 116 aa13.77□□□□□ -0.21
HOXA9-205ENST00000489695 SLC7A5P1Q8MH63 180 aa13.77□□□□□ -0.21
HOXA9-205ENST00000489695 C1orf196B1AJZ1 125 aa13.76□□□□□ -0.21
HOXA9-205ENST00000489695 F8W036 122 aa13.76□□□□□ -0.21
HOXA9-205ENST00000489695 TNFRSF6BO95407 300 aa13.76□□□□□ -0.21
HOXA9-205ENST00000489695 MRPL54Q6P161 138 aaKnown RBP13.76□□□□□ -0.21
HOXA9-205ENST00000489695 TMEM18Q96B42 140 aa13.76□□□□□ -0.21
HOXA9-205ENST00000489695 UQCC3Q6UW78 93 aa13.75□□□□□ -0.21
HOXA9-205ENST00000489695 PPBPP02775 128 aa13.74□□□□□ -0.21
HOXA9-205ENST00000489695 ATP5L2Q7Z4Y8 100 aa13.74□□□□□ -0.21
HOXA9-205ENST00000489695 PKIGQ9Y2B9 76 aa13.74□□□□□ -0.21
HOXA9-205ENST00000489695 D6R8Y8 96 aa13.73□□□□□ -0.21
HOXA9-205ENST00000489695 LINC00526Q96FQ7 95 aa13.73□□□□□ -0.21
HOXA9-205ENST00000489695 SMIM2Q9BVW6 85 aa13.73□□□□□ -0.21
HOXA9-205ENST00000489695 ZNF561-AS1K7EIQ3 104 aa13.71□□□□□ -0.21
HOXA9-205ENST00000489695 NPYP01303 97 aa13.71□□□□□ -0.21
HOXA9-205ENST00000489695 Q6ZUT4 128 aa13.71□□□□□ -0.21
HOXA9-205ENST00000489695 FAM104AQ969W3 186 aa13.71□□□□□ -0.21
HOXA9-205ENST00000489695 CARD19Q96LW7 228 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms