RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
ERGIC3-217ENST00000488935 ESDP10768 282 aa9.9□□□□□ -0.82
ERGIC3-217ENST00000488935 RNASE13Q5GAN3 156 aaKnown RBP9.9□□□□□ -0.82
ERGIC3-217ENST00000488935 TMEM101Q96IK0 257 aa9.9□□□□□ -0.82
ERGIC3-217ENST00000488935 BTF3L4Q96K17 158 aa9.9□□□□□ -0.82
ERGIC3-217ENST00000488935 LINC01600Q96MT4 127 aa9.9□□□□□ -0.82
ERGIC3-217ENST00000488935 H7C423 109 aa9.89□□□□□ -0.83
ERGIC3-217ENST00000488935 PEA15Q15121 130 aa9.89□□□□□ -0.83
ERGIC3-217ENST00000488935 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
ERGIC3-217ENST00000488935 SMDT1Q9H4I9 107 aa9.89□□□□□ -0.83
ERGIC3-217ENST00000488935 ST20Q9HBF5 79 aa9.89□□□□□ -0.83
ERGIC3-217ENST00000488935 A8MWL6 223 aa9.88□□□□□ -0.83
ERGIC3-217ENST00000488935 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
ERGIC3-217ENST00000488935 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
ERGIC3-217ENST00000488935 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
ERGIC3-217ENST00000488935 SRP19P09132 144 aaKnown RBP9.87□□□□□ -0.83
ERGIC3-217ENST00000488935 GAGE2BQ13066 116 aa9.87□□□□□ -0.83
ERGIC3-217ENST00000488935 CDC42SE2Q9NRR3 84 aa9.87□□□□□ -0.83
ERGIC3-217ENST00000488935 ZNF25P17030 456 aaPredicted RBP9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 RAB4AP20338 218 aa9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 POLR2KP53803 58 aaKnown RBP9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 SYCNQ0VAF6 134 aa9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 SS18Q15532 418 aa9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 FAM231DQ6ZW35 169 aa9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
ERGIC3-217ENST00000488935 IGLV4-69A0A075B6H9 119 aa9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 A0A1W2PNN7 141 aa9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 HIGD1CA8MV81 97 aa9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 ZNF561-AS1K7EIQ3 104 aa9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 SRSF3P84103 164 aaKnown RBP9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 ZNF664Q8N3J9 261 aa9.85□□□□□ -0.83
ERGIC3-217ENST00000488935 A0A1B0GUT8 65 aa9.84□□□□□ -0.83
ERGIC3-217ENST00000488935 C9JQL5 133 aa9.84□□□□□ -0.83
ERGIC3-217ENST00000488935 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
ERGIC3-217ENST00000488935 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
ERGIC3-217ENST00000488935 BORCS7Q96B45 105 aa9.84□□□□□ -0.83
ERGIC3-217ENST00000488935 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 C7orf77A4D0Y5 90 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 LINC00862A6NCI5 91 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 CAMPP49913 170 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 SRSF9Q13242 221 aaKnown RBP eCLIP9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 C5orf38Q86SI9 138 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 SMIM7Q9BQ49 75 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 TMEM191AQ9H0A3 160 aa9.83□□□□□ -0.84
ERGIC3-217ENST00000488935 TRAV13-1A0A0B4J241 112 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 ZNF727A8MUV8 499 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 FAM74A3Q4VXF1 159 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 SPINK6Q6UWN8 80 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 LINC01551Q86U37 167 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 TSKUQ8WUA8 353 aa9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
ERGIC3-217ENST00000488935 TRBV27A0A0K0K1C4 114 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 MALP21145 153 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 FCER1GP30273 86 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 CT83Q5H943 113 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 UQCC3Q6UW78 93 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 MRPL52Q86TS9 123 aaKnown RBP9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 LPAP08519 4548 aa9.81□□□□□ -0.84
ERGIC3-217ENST00000488935 Q6ZRP5 223 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 Q6ZUT4 128 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 NRACQ8N912 160 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 NUP35Q8NFH5 326 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 UBE2D4Q9Y2X8 147 aa9.8□□□□□ -0.84
ERGIC3-217ENST00000488935 LOC107984640A0A0U1RRK4 108 aa9.79□□□□□ -0.84
ERGIC3-217ENST00000488935 COX7A2LO14548 114 aa9.79□□□□□ -0.84
ERGIC3-217ENST00000488935 PHF5AQ7RTV0 110 aaKnown RBP9.79□□□□□ -0.84
ERGIC3-217ENST00000488935 CAMK2N2Q96S95 79 aa9.79□□□□□ -0.84
ERGIC3-217ENST00000488935 V9GYV3 84 aa9.79□□□□□ -0.84
ERGIC3-217ENST00000488935 VCYO14598 125 aa9.78□□□□□ -0.84
ERGIC3-217ENST00000488935 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
ERGIC3-217ENST00000488935 TMEM241Q24JQ0 296 aa9.78□□□□□ -0.84
ERGIC3-217ENST00000488935 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
ERGIC3-217ENST00000488935 OSTCQ9NRP0 149 aa9.78□□□□□ -0.84
ERGIC3-217ENST00000488935 C1orf196B1AJZ1 125 aa9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 RPL39P62891 51 aaKnown RBP9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 MRPL51Q4U2R6 128 aaKnown RBP9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 C9orf116Q5BN46 136 aaPredicted RBP9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 NAT8Q9UHE5 227 aa9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 PSORS1C2Q9UIG4 136 aa9.77□□□□□ -0.85
ERGIC3-217ENST00000488935 SUMO2P61956 95 aaKnown RBP9.76□□□□□ -0.85
ERGIC3-217ENST00000488935 RIGQ13278 110 aa9.76□□□□□ -0.85
ERGIC3-217ENST00000488935 TMEM218A2RU14 115 aa9.75□□□□□ -0.85
ERGIC3-217ENST00000488935 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
ERGIC3-217ENST00000488935 ISOC2Q96AB3 205 aa9.75□□□□□ -0.85
ERGIC3-217ENST00000488935 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 APOMO95445 188 aa9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 MT-ND6P03923 174 aa9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 RPL23P62829 140 aaKnown RBP9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 SPAG11BQ08648 103 aa9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
ERGIC3-217ENST00000488935 ADIRFQ15847 76 aa9.73□□□□□ -0.85
ERGIC3-217ENST00000488935 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
ERGIC3-217ENST00000488935 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
ERGIC3-217ENST00000488935 FAM104BQ5XKR9 115 aa9.73□□□□□ -0.85
ERGIC3-217ENST00000488935 KIR2DL4Q99706 377 aa9.73□□□□□ -0.85
ERGIC3-217ENST00000488935 PKIGQ9Y2B9 76 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms