RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 H7C423 109 aa9.69□□□□□ -0.86
TRIM50-203ENST00000488217 NCR2O95944 276 aa9.69□□□□□ -0.86
TRIM50-203ENST00000488217 FOXA3P55318 350 aaPredicted RBP9.69□□□□□ -0.86
TRIM50-203ENST00000488217 CT83Q5H943 113 aa9.69□□□□□ -0.86
TRIM50-203ENST00000488217 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
TRIM50-203ENST00000488217 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
TRIM50-203ENST00000488217 RPL39LQ96EH5 51 aaKnown RBP9.69□□□□□ -0.86
TRIM50-203ENST00000488217 V9GYV3 84 aa9.69□□□□□ -0.86
TRIM50-203ENST00000488217 PRSS3P2Q8NHM4 247 aa9.68□□□□□ -0.86
TRIM50-203ENST00000488217 FGF6P10767 208 aa9.67□□□□□ -0.86
TRIM50-203ENST00000488217 HIGD2BQ4VC39 106 aa9.67□□□□□ -0.86
TRIM50-203ENST00000488217 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
TRIM50-203ENST00000488217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
TRIM50-203ENST00000488217 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
TRIM50-203ENST00000488217 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 I3L3M4 83 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 APCSP02743 223 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 PMCHP20382 165 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 MAJINQ3KP22 176 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 C7orf33Q8WU49 177 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 TNXBP22105 4242 aa9.66□□□□□ -0.86
TRIM50-203ENST00000488217 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
TRIM50-203ENST00000488217 PHOX2AO14813 284 aa9.65□□□□□ -0.86
TRIM50-203ENST00000488217 PPP1R2P9O14990 202 aa9.65□□□□□ -0.86
TRIM50-203ENST00000488217 MT-ND4LP03901 98 aa9.65□□□□□ -0.86
TRIM50-203ENST00000488217 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
TRIM50-203ENST00000488217 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
TRIM50-203ENST00000488217 FOXI1Q12951 378 aa9.64□□□□□ -0.87
TRIM50-203ENST00000488217 OR5A1Q8NGJ0 315 aa9.64□□□□□ -0.87
TRIM50-203ENST00000488217 ANAPC16Q96DE5 110 aa9.64□□□□□ -0.87
TRIM50-203ENST00000488217 BTF3L4Q96K17 158 aa9.64□□□□□ -0.87
TRIM50-203ENST00000488217 TRBV6-5A0A0K0K1A5 114 aa9.63□□□□□ -0.87
TRIM50-203ENST00000488217 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
TRIM50-203ENST00000488217 HIGD1CA8MV81 97 aa9.63□□□□□ -0.87
TRIM50-203ENST00000488217 ZNF25P17030 456 aaPredicted RBP9.63□□□□□ -0.87
TRIM50-203ENST00000488217 STPG4Q8N801 248 aa9.63□□□□□ -0.87
TRIM50-203ENST00000488217 TMEM101Q96IK0 257 aa9.63□□□□□ -0.87
TRIM50-203ENST00000488217 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
TRIM50-203ENST00000488217 ESDP10768 282 aa9.62□□□□□ -0.87
TRIM50-203ENST00000488217 XCL1P47992 114 aa9.62□□□□□ -0.87
TRIM50-203ENST00000488217 NUP35Q8NFH5 326 aa9.62□□□□□ -0.87
TRIM50-203ENST00000488217 ST20Q9HBF5 79 aa9.62□□□□□ -0.87
TRIM50-203ENST00000488217 C7orf77A4D0Y5 90 aa9.61□□□□□ -0.87
TRIM50-203ENST00000488217 CTDSP1Q9GZU7 261 aa9.61□□□□□ -0.87
TRIM50-203ENST00000488217 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
TRIM50-203ENST00000488217 NAT8BQ9UHF3 227 aa9.61□□□□□ -0.87
TRIM50-203ENST00000488217 IGHV1-58A0A0C4DH39 117 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 CCL25O15444 150 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 CDC42SE2Q9NRR3 84 aa9.6□□□□□ -0.87
TRIM50-203ENST00000488217 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 TSHBP01222 138 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
TRIM50-203ENST00000488217 RHEBQ15382 184 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 SS18Q15532 418 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 LINC00526Q96FQ7 95 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
TRIM50-203ENST00000488217 A0A096LNI7 61 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 RAB4AP20338 218 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 PRR3P79522 188 aaKnown RBP9.58□□□□□ -0.88
TRIM50-203ENST00000488217 CD164L2Q6UWJ8 174 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 TMEM191AQ9H0A3 160 aa9.58□□□□□ -0.88
TRIM50-203ENST00000488217 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 RIGQ13278 110 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 MRPL52Q86TS9 123 aaKnown RBP9.57□□□□□ -0.88
TRIM50-203ENST00000488217 IMMP2LQ96T52 175 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 TMEM242Q9NWH2 141 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
TRIM50-203ENST00000488217 VCYO14598 125 aa9.56□□□□□ -0.88
TRIM50-203ENST00000488217 LRP2P98164 4655 aa9.56□□□□□ -0.88
TRIM50-203ENST00000488217 SYCNQ0VAF6 134 aa9.55□□□□□ -0.88
TRIM50-203ENST00000488217 SPINK6Q6UWN8 80 aa9.55□□□□□ -0.88
TRIM50-203ENST00000488217 CBLN2Q8IUK8 224 aa9.55□□□□□ -0.88
TRIM50-203ENST00000488217 CARD19Q96LW7 228 aa9.55□□□□□ -0.88
TRIM50-203ENST00000488217 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
TRIM50-203ENST00000488217 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
TRIM50-203ENST00000488217 MRPL54Q6P161 138 aaKnown RBP9.54□□□□□ -0.88
TRIM50-203ENST00000488217 A0A1B0GW15 77 aa9.53□□□□□ -0.88
TRIM50-203ENST00000488217 C1orf196B1AJZ1 125 aa9.53□□□□□ -0.88
TRIM50-203ENST00000488217 CAMPP49913 170 aa9.53□□□□□ -0.88
TRIM50-203ENST00000488217 KRTAP10-8P60410 259 aa9.53□□□□□ -0.88
TRIM50-203ENST00000488217 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
TRIM50-203ENST00000488217 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 PPP1R17O96001 155 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 MALP21145 153 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 S100PP25815 95 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 HBBP68871 147 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 Q6ZRP5 223 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 ATP5L2Q7Z4Y8 100 aa9.52□□□□□ -0.89
TRIM50-203ENST00000488217 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
TRIM50-203ENST00000488217 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
TRIM50-203ENST00000488217 TRAV9-1A0A075B6T8 112 aa9.51□□□□□ -0.89
TRIM50-203ENST00000488217 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
TRIM50-203ENST00000488217 COX7A2LO14548 114 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms