RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TMEM241Q24JQ0 296 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 SPACA4Q8TDM5 124 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 RNF185Q96GF1 192 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 NAT8Q9UHE5 227 aa7.73□□□□□ -1.17
VPS16-208ENST00000487461 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.72□□□□□ -1.17
VPS16-208ENST00000487461 IGKV2-29A2NJV5 120 aaPredicted RBP7.72□□□□□ -1.17
VPS16-208ENST00000487461 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
VPS16-208ENST00000487461 AMMECR1LQ6DCA0 310 aa7.72□□□□□ -1.17
VPS16-208ENST00000487461 Q6ZRU5 148 aa7.72□□□□□ -1.17
VPS16-208ENST00000487461 ISOC2Q96AB3 205 aa7.72□□□□□ -1.17
VPS16-208ENST00000487461 PLAC8Q9NZF1 115 aa7.72□□□□□ -1.17
VPS16-208ENST00000487461 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 H7C423 109 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 NCR2O95944 276 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 SMIM6P0DI80 62 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 RPS10P46783 165 aaKnown RBP7.71□□□□□ -1.18
VPS16-208ENST00000487461 COX6A2Q02221 97 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 HIGD2BQ4VC39 106 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.18
VPS16-208ENST00000487461 PRSS3P2Q8NHM4 247 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
VPS16-208ENST00000487461 ANAPC16Q96DE5 110 aa7.71□□□□□ -1.18
VPS16-208ENST00000487461 FAM231BA6NCW3 169 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 SDHAF1A6NFY7 115 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 GATCO43716 136 aaKnown RBP7.7□□□□□ -1.18
VPS16-208ENST00000487461 FGF6P10767 208 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 AKR1D1P51857 326 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 SMIM15Q7Z3B0 74 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 BTF3L4Q96K17 158 aa7.7□□□□□ -1.18
VPS16-208ENST00000487461 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 APCSP02743 223 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 PMCHP20382 165 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 CEBPGP53567 150 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 FOXI1Q12951 378 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 FAM231DQ6ZW35 169 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 IMMP2LQ96T52 175 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 C12orf57Q99622 126 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 SMIM7Q9BQ49 75 aa7.69□□□□□ -1.18
VPS16-208ENST00000487461 GVQW2A0A096LPI5 108 aaPredicted RBP7.68□□□□□ -1.18
VPS16-208ENST00000487461 TRBV6-5A0A0K0K1A5 114 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 A8MWL6 223 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 I3L3M4 83 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 PHOX2AO14813 284 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
VPS16-208ENST00000487461 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 MAJINQ3KP22 176 aa7.68□□□□□ -1.18
VPS16-208ENST00000487461 IGKV2-24A0A0C4DH68 120 aa7.67□□□□□ -1.18
VPS16-208ENST00000487461 PPP1R2P9O14990 202 aa7.67□□□□□ -1.18
VPS16-208ENST00000487461 ESDP10768 282 aa7.67□□□□□ -1.18
VPS16-208ENST00000487461 OR5A1Q8NGJ0 315 aa7.67□□□□□ -1.18
VPS16-208ENST00000487461 TGIF2-C20orf24A0A0A6YYL0 155 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 TSHBP01222 138 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 ZNF25P17030 456 aaPredicted RBP7.66□□□□□ -1.18
VPS16-208ENST00000487461 S100PP25815 95 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 XCL1P47992 114 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 C7orf33Q8WU49 177 aa7.66□□□□□ -1.18
VPS16-208ENST00000487461 A0A096LNI7 61 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 CCL25O15444 150 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
VPS16-208ENST00000487461 CT83Q5H943 113 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 STPG4Q8N801 248 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 LINC00526Q96FQ7 95 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 TMEM101Q96IK0 257 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
VPS16-208ENST00000487461 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 RAB4AP20338 218 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 ADIRFQ15847 76 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 COA6Q5JTJ3 125 aaKnown RBP7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
VPS16-208ENST00000487461 TRAV9-1A0A075B6T8 112 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 IGHV1-58A0A0C4DH39 117 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 A0A1B0GUT8 65 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 HIGD1CA8MV81 97 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 TRGC2P03986 189 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 NDUFA6P56556 154 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 PRR3P79522 188 aaKnown RBP7.63□□□□□ -1.19
VPS16-208ENST00000487461 LINC01551Q86U37 167 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 TSKUQ8WUA8 353 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 BORCS7Q96B45 105 aa7.63□□□□□ -1.19
VPS16-208ENST00000487461 TRBV27A0A0K0K1C4 114 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 SS18Q15532 418 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 MRPL52Q86TS9 123 aaKnown RBP7.62□□□□□ -1.19
VPS16-208ENST00000487461 AMN1Q8IY45 258 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 ZNF664Q8N3J9 261 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 MRAP2Q96G30 205 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
VPS16-208ENST00000487461 SMKR1H3BMG3 65 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms