RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 VCYO14598 125 aa12.18□□□□□ -0.46
CLIP2-206ENST00000487091 FOXI1Q12951 378 aa12.18□□□□□ -0.46
CLIP2-206ENST00000487091 ADIRFQ15847 76 aa12.18□□□□□ -0.46
CLIP2-206ENST00000487091 GVQW2A0A096LPI5 108 aaPredicted RBP12.17□□□□□ -0.46
CLIP2-206ENST00000487091 LINC00959A0A1B0GUT2 108 aa12.17□□□□□ -0.46
CLIP2-206ENST00000487091 C7orf77A4D0Y5 90 aa12.17□□□□□ -0.46
CLIP2-206ENST00000487091 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
CLIP2-206ENST00000487091 SMIM27A0A1W2PRY6 76 aa12.16□□□□□ -0.46
CLIP2-206ENST00000487091 OXTP01178 125 aa12.16□□□□□ -0.46
CLIP2-206ENST00000487091 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
CLIP2-206ENST00000487091 NRACQ8N912 160 aa12.16□□□□□ -0.46
CLIP2-206ENST00000487091 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
CLIP2-206ENST00000487091 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
CLIP2-206ENST00000487091 XCL1P47992 114 aa12.15□□□□□ -0.46
CLIP2-206ENST00000487091 SUMO2P61956 95 aaKnown RBP12.15□□□□□ -0.46
CLIP2-206ENST00000487091 SRSF3P84103 164 aaKnown RBP12.15□□□□□ -0.46
CLIP2-206ENST00000487091 FAM104BQ5XKR9 115 aa12.15□□□□□ -0.46
CLIP2-206ENST00000487091 SPACA4Q8TDM5 124 aa12.15□□□□□ -0.46
CLIP2-206ENST00000487091 A0A087WYN8 130 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 A0A1B0GW15 77 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 PPP1R2P9O14990 202 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 CCL25O15444 150 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 FCER1GP30273 86 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 SS18Q15532 418 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
CLIP2-206ENST00000487091 CSDC2Q9Y534 153 aaKnown RBP12.14□□□□□ -0.47
CLIP2-206ENST00000487091 LRP1Q07954 4544 aaKnown RBP12.13□□□□□ -0.47
CLIP2-206ENST00000487091 LINC00862A6NCI5 91 aa12.13□□□□□ -0.47
CLIP2-206ENST00000487091 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
CLIP2-206ENST00000487091 SMAGPQ0VAQ4 97 aa12.13□□□□□ -0.47
CLIP2-206ENST00000487091 MRPL51Q4U2R6 128 aaKnown RBP12.13□□□□□ -0.47
CLIP2-206ENST00000487091 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
CLIP2-206ENST00000487091 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
CLIP2-206ENST00000487091 COX6A2Q02221 97 aa12.12□□□□□ -0.47
CLIP2-206ENST00000487091 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
CLIP2-206ENST00000487091 CAMPP49913 170 aa12.11□□□□□ -0.47
CLIP2-206ENST00000487091 C20orf78Q9BR46 151 aa12.11□□□□□ -0.47
CLIP2-206ENST00000487091 PLAC8Q9NZF1 115 aa12.11□□□□□ -0.47
CLIP2-206ENST00000487091 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
CLIP2-206ENST00000487091 PRSS3P2Q8NHM4 247 aa12.1□□□□□ -0.47
CLIP2-206ENST00000487091 S100A8P05109 93 aa12.09□□□□□ -0.47
CLIP2-206ENST00000487091 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
CLIP2-206ENST00000487091 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
CLIP2-206ENST00000487091 UBE2D4Q9Y2X8 147 aa12.09□□□□□ -0.47
CLIP2-206ENST00000487091 C1orf196B1AJZ1 125 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 TCAPO15273 167 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 CKS2P33552 79 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 TMEM18Q96B42 140 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 PKIGQ9Y2B9 76 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 FAT3Q8TDW7 4589 aa12.08□□□□□ -0.48
CLIP2-206ENST00000487091 F8W036 122 aa12.07□□□□□ -0.48
CLIP2-206ENST00000487091 HBBP68871 147 aa12.07□□□□□ -0.48
CLIP2-206ENST00000487091 PKHD1L1Q86WI1 4243 aa12.07□□□□□ -0.48
CLIP2-206ENST00000487091 A0A1B0GXF2 115 aa12.06□□□□□ -0.48
CLIP2-206ENST00000487091 MAJINQ3KP22 176 aa12.06□□□□□ -0.48
CLIP2-206ENST00000487091 IGKV2-24A0A0C4DH68 120 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 ZNF561-AS1K7EIQ3 104 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 MRPL54Q6P161 138 aaKnown RBP12.05□□□□□ -0.48
CLIP2-206ENST00000487091 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 LINC00474Q9P2X8 69 aa12.05□□□□□ -0.48
CLIP2-206ENST00000487091 PHOX2AO14813 284 aa12.04□□□□□ -0.48
CLIP2-206ENST00000487091 Q6ZRU5 148 aa12.04□□□□□ -0.48
CLIP2-206ENST00000487091 LINC00526Q96FQ7 95 aa12.04□□□□□ -0.48
CLIP2-206ENST00000487091 A0A096LNI7 61 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 D6R8Y8 96 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 COX7A2LO14548 114 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 PPBPP02775 128 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 SYCNQ0VAF6 134 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 SERTAD4-AS1Q5TG53 156 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 STPG4Q8N801 248 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
CLIP2-206ENST00000487091 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
CLIP2-206ENST00000487091 MALP21145 153 aa12.02□□□□□ -0.49
CLIP2-206ENST00000487091 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
CLIP2-206ENST00000487091 Q6ZUT4 128 aa12.02□□□□□ -0.49
CLIP2-206ENST00000487091 ATP5L2Q7Z4Y8 100 aa12.02□□□□□ -0.49
CLIP2-206ENST00000487091 NPYP01303 97 aa12□□□□□ -0.49
CLIP2-206ENST00000487091 IGLV4-69A0A075B6H9 119 aa11.99□□□□□ -0.49
CLIP2-206ENST00000487091 RPL39P62891 51 aaKnown RBP11.99□□□□□ -0.49
CLIP2-206ENST00000487091 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
CLIP2-206ENST00000487091 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
CLIP2-206ENST00000487091 APOMO95445 188 aa11.98□□□□□ -0.49
CLIP2-206ENST00000487091 MRPS36P82909 103 aaKnown RBP11.98□□□□□ -0.49
CLIP2-206ENST00000487091 PNRC1Q12796 327 aaPredicted RBP11.98□□□□□ -0.49
CLIP2-206ENST00000487091 TMEM136Q6ZRR5 245 aa11.97□□□□□ -0.49
CLIP2-206ENST00000487091 C5orf38Q86SI9 138 aa11.97□□□□□ -0.49
CLIP2-206ENST00000487091 FAM104AQ969W3 186 aa11.97□□□□□ -0.49
CLIP2-206ENST00000487091 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
CLIP2-206ENST00000487091 RAB14P61106 215 aa11.96□□□□□ -0.49
CLIP2-206ENST00000487091 CAMK2N2Q96S95 79 aa11.96□□□□□ -0.49
CLIP2-206ENST00000487091 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 MT-ND4LP03901 98 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 RAB5AP20339 215 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 PTTG1IPP53801 180 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 ANAPC16Q96DE5 110 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
CLIP2-206ENST00000487091 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms