RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 C10orf91Q5T1B1 145 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 AMTNQ6UX39 209 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 OR8A1Q8NGG7 326 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 FMC1Q96HJ9 113 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 ZNF492Q9P255 531 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 LAMTOR2Q9Y2Q5 125 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 FBN3Q75N90 2809 aa3.34□□□□□ -1.87
RTN4-214ENST00000486085 HUWE1Q7Z6Z7 4374 aaKnown RBP3.34□□□□□ -1.87
RTN4-214ENST00000486085 A0A1B0GV50 99 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 PGPA6NDG6 321 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 C1orf196B1AJZ1 125 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 HLA-DQA1P01909 254 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 TSPOP30536 169 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 HIST1H1AQ02539 215 aaPredicted RBP3.33□□□□□ -1.88
RTN4-214ENST00000486085 PEA15Q15121 130 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 TDRG1Q3Y452 100 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 Q6AWC8 147 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 SLC25A34Q6PIV7 304 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 NEGR1Q7Z3B1 354 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 CMTM2Q8TAZ6 248 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 IGF2BP2-AS1Q96M15 143 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 SLC35B3Q9H1N7 401 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
RTN4-214ENST00000486085 IGHV3-49A0A0A0MS15 119 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 FABP5P3A8MUU1 101 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 M0R3E3 92 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 BPY2O14599 106 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 SRP19P09132 144 aaKnown RBP3.32□□□□□ -1.88
RTN4-214ENST00000486085 ATP5G3P48201 142 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 EMP1P54849 157 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 DEFB131AP59861 70 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 TMEM241Q24JQ0 296 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 PYY3Q5JQD4 70 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 EBLN2Q6P2I7 272 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 Q86TA4 180 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 TMEM256Q8N2U0 113 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 EXOC3-AS1Q8N2X6 119 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 ZFAND2AQ8N6M9 145 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 SEC11CQ9BY50 192 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 AGPAT4-IT1Q9H0P7 198 aa3.32□□□□□ -1.88
RTN4-214ENST00000486085 TRBV20OR9-2A0A075B6H5 130 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 H7C1H1 209 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 M0R2Z0 102 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 IGLV2-8P01709 118 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 CD7P09564 240 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 ZNF688P0C7X2 276 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 S100A2P29034 98 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 PRR3P79522 188 aaKnown RBP3.31□□□□□ -1.88
RTN4-214ENST00000486085 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 MPV17L2Q567V2 206 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 ZNF705AQ6ZN79 300 aaPredicted RBP3.31□□□□□ -1.88
RTN4-214ENST00000486085 C11orf72Q8NBR9 251 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 BLNKQ8WV28 456 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 PLEKHB2Q96CS7 222 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 TMEM70Q9BUB7 260 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 EIF5A2Q9GZV4 153 aaKnown RBP3.31□□□□□ -1.88
RTN4-214ENST00000486085 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
RTN4-214ENST00000486085 TMEM242Q9NWH2 141 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 PKIGQ9Y2B9 76 aa3.31□□□□□ -1.88
RTN4-214ENST00000486085 LOC102724200A0A096LPH7 203 aaPredicted RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 C19orf71A6NCJ1 209 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 ZNF705FA8MVS1 300 aaPredicted RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 B4DEV8 164 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 C9JAW5 83 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 C9JQL5 133 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 ZNF705DP0CH99 300 aaPredicted RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 ZNF705BP0CI00 300 aaPredicted RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 HLA-DMBP28068 263 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 FOXA3P55318 350 aaPredicted RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 UBE2G1P62253 170 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 IBA57Q5T440 356 aaKnown RBP3.3□□□□□ -1.88
RTN4-214ENST00000486085 GDF5OSQ5U4N7 250 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 OR4B1Q8NGF8 309 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 CIRBP-AS1Q8TBR5 109 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 RMI2Q96E14 147 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 TVP23CQ96ET8 276 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 C18orf15Q96N68 181 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 TM2D3Q9BRN9 247 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 OSTCQ9NRP0 149 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 NAT8Q9UHE5 227 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
RTN4-214ENST00000486085 NBEAL2Q6ZNJ1 2754 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 IGKV2-40A0A087WW87 121 aaPredicted RBP3.29□□□□□ -1.88
RTN4-214ENST00000486085 A0A087WWC5 75 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 TRAV21A0A0B4J279 112 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 FAM236DA0A1B0GTK5 79 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 C7orf71A4D174 169 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 H7BYZ3 331 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 K7EIL1 84 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 IGKV2D-40P01614 121 aaPredicted RBP3.29□□□□□ -1.88
RTN4-214ENST00000486085 SFTA3P0C7M3 94 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 FAM236CP0DP71 79 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 ADCYAP1P18509 176 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 GNG4P50150 75 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 FABP9Q0Z7S8 132 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 CENPWQ5EE01 88 aa3.29□□□□□ -1.88
RTN4-214ENST00000486085 BAGE2Q86Y30 109 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms