RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ADIRFQ15847 76 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 V9GYV3 84 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
CCM2-213ENST00000480658 ESDP10768 282 aa7.37□□□□□ -1.23
CCM2-213ENST00000480658 RPS10P46783 165 aaKnown RBP7.37□□□□□ -1.23
CCM2-213ENST00000480658 POLR2KP53803 58 aaKnown RBP7.37□□□□□ -1.23
CCM2-213ENST00000480658 DPH3Q96FX2 82 aa7.37□□□□□ -1.23
CCM2-213ENST00000480658 C20orf78Q9BR46 151 aa7.37□□□□□ -1.23
CCM2-213ENST00000480658 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 IGKV3OR2-268A0A0C4DH90 116 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 A6NJY4 79 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 TSHBP01222 138 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 PPBPP02775 128 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 RPL23P62829 140 aaKnown RBP7.36□□□□□ -1.23
CCM2-213ENST00000480658 RPL32P62910 135 aaKnown RBP7.36□□□□□ -1.23
CCM2-213ENST00000480658 AMN1Q8IY45 258 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 C7orf33Q8WU49 177 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 TMEM242Q9NWH2 141 aa7.36□□□□□ -1.23
CCM2-213ENST00000480658 FAT1Q14517 4588 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 SMIM27A0A1W2PRY6 76 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 CD164L2Q6UWJ8 174 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 ZNF664Q8N3J9 261 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 C15orf56Q8N910 161 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 SPACA4Q8TDM5 124 aa7.35□□□□□ -1.23
CCM2-213ENST00000480658 TRBV24-1A0A075B6N3 115 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 LINC00959A0A1B0GUT2 108 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 PHOX2AO14813 284 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 XCL1P47992 114 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 HBBP68871 147 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
CCM2-213ENST00000480658 FOXI1Q12951 378 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 FAM104BQ5XKR9 115 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 ATP5L2Q7Z4Y8 100 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
CCM2-213ENST00000480658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
CCM2-213ENST00000480658 APOMO95445 188 aa7.33□□□□□ -1.24
CCM2-213ENST00000480658 MALP21145 153 aa7.33□□□□□ -1.24
CCM2-213ENST00000480658 CKS2P33552 79 aa7.33□□□□□ -1.24
CCM2-213ENST00000480658 RAB14P61106 215 aa7.33□□□□□ -1.24
CCM2-213ENST00000480658 SERTAD4-AS1Q5TG53 156 aa7.33□□□□□ -1.24
CCM2-213ENST00000480658 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 CAMPP49913 170 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 IFITM2Q01629 132 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 NRACQ8N912 160 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 PLAC8Q9NZF1 115 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 MYCBP2O75592 4640 aa7.32□□□□□ -1.24
CCM2-213ENST00000480658 COX7A2LO14548 114 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
CCM2-213ENST00000480658 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
CCM2-213ENST00000480658 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 Q6ZRU5 148 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 CARD19Q96LW7 228 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 SPANXA1Q9NS26 97 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 LAMTOR2Q9Y2Q5 125 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 UBE2D4Q9Y2X8 147 aa7.31□□□□□ -1.24
CCM2-213ENST00000480658 A0A087WYN8 130 aa7.3□□□□□ -1.24
CCM2-213ENST00000480658 F8WDY8 70 aa7.3□□□□□ -1.24
CCM2-213ENST00000480658 COX6A2Q02221 97 aa7.3□□□□□ -1.24
CCM2-213ENST00000480658 ORMDL3Q8N138 153 aa7.3□□□□□ -1.24
CCM2-213ENST00000480658 TNFRSF6BO95407 300 aa7.29□□□□□ -1.24
CCM2-213ENST00000480658 SLPIP03973 132 aa7.29□□□□□ -1.24
CCM2-213ENST00000480658 ANAPC16Q96DE5 110 aa7.29□□□□□ -1.24
CCM2-213ENST00000480658 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
CCM2-213ENST00000480658 K7EMI3 77 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 GAS8-AS1O95177 125 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 MT-ND4LP03901 98 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 RAB5AP20339 215 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 SYCNQ0VAF6 134 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 MAJINQ3KP22 176 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
CCM2-213ENST00000480658 IGLV4-69A0A075B6H9 119 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 IGKV2-24A0A0C4DH68 120 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 LOC107984640A0A0U1RRK4 108 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 A0A1B0GXF2 115 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 D6R8Y8 96 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 IFI27P40305 119 aaPredicted RBP7.27□□□□□ -1.25
CCM2-213ENST00000480658 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
CCM2-213ENST00000480658 MRPL54Q6P161 138 aaKnown RBP7.27□□□□□ -1.25
CCM2-213ENST00000480658 STPG4Q8N801 248 aa7.27□□□□□ -1.25
CCM2-213ENST00000480658 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
CCM2-213ENST00000480658 C9JQL5 133 aa7.26□□□□□ -1.25
CCM2-213ENST00000480658 PANO1I0J062 215 aa7.26□□□□□ -1.25
CCM2-213ENST00000480658 G0S2P27469 103 aa7.26□□□□□ -1.25
CCM2-213ENST00000480658 CAMK2N2Q96S95 79 aa7.26□□□□□ -1.25
CCM2-213ENST00000480658 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
CCM2-213ENST00000480658 NPSP0C0P6 89 aa7.25□□□□□ -1.25
CCM2-213ENST00000480658 CHTF8P0CG12 524 aa7.25□□□□□ -1.25
CCM2-213ENST00000480658 SRSF3P84103 164 aaKnown RBP7.25□□□□□ -1.25
CCM2-213ENST00000480658 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
CCM2-213ENST00000480658 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
CCM2-213ENST00000480658 A0A096LNI7 61 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 TGIF2-C20orf24A0A0A6YYL0 155 aa7.24□□□□□ -1.25
CCM2-213ENST00000480658 RNF151Q2KHN1 245 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms